PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00347.1.g00450.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 332aa    MW: 34981.4 Da    PI: 9.3932
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00347.1.g00450.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.25.3e-07245277642
                                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHH CS
                             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKae 42 
                                     +++Er RR ri +++ +L+el+P+ +     k ++K +
  Zmw_sc00347.1.g00450.1.sm.mkhc 245 SIAERERRTRISEKLRKLQELVPNmD-----KPPNKLS 277
                                     689*********************55.....4455544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.07E-7242278IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.13E-5243279No hitNo description
Gene3DG3DSA:4.10.280.102.9E-6244277IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-4245278IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MRRFMPGSGG VEPSSSPSSG GQQRHHQHGE RGGDTAAAGG LRYGGGDISL GHGHDGRLPQ  60
LGVDSAGRNE DRQQDGSMDM LARHSSSPAG FFSNLVMDNG YPSSKGAGGS GAEPHHHPSK  120
ASNVNSRKIN FTRQQQQGAA SGHLSQISEL DGGAFPPGLS AGGRSSGESS GAASRSFSGG  180
FSIVGPWEES REIIATLGAY DPQFSGAMAG SALEMAGMDR YLQLQQDQVP FKVRAKRGCA  240
THPRSIAERE RRTRISEKLR KLQELVPNMD KPPNKLSTAN QRNVPDGTAN EHSGHVGPCS  300
GAHQGSAERA ADSEARAREV YLLQKAMTVA TY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025808991.11e-100transcription factor bHLH128-like
TrEMBLA0A1E5USQ61e-100A0A1E5USQ6_9POAL; Transcription factor bHLH128
STRINGPavir.Aa01423.1.p1e-97(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP115313141