PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00347.1.g00050.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 252aa    MW: 28072.3 Da    PI: 4.984
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00347.1.g00050.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM41.93e-133811067128
                             NAM  67 kyatgkrknra..........tksgyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128
                                     +y  g+rk+r            ++ +W++tgk+k++++ +g ++g kk+Lv+yk   r  ++e++ Wvmh+y+l
  Zmw_sc00347.1.g00050.1.sm.mkhc  38 AYGCGQRKRRRvitctdhtvsDEHMRWHKTGKSKAIYN-NGVKKGWKKILVLYKTpqRGGRPERAPWVMHQYHL 110
                                     67778888885477776655445788************.999***********7533666778*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100516.4821129IPR003441NAC domain
SuperFamilySSF1019413.4E-232129IPR003441NAC domain
PfamPF023653.4E-109110IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
VAVQWPGLPA GVKFDPSDLQ LLEHLENKIG VGGSEPHAYG CGQRKRRRVI TCTDHTVSDE  60
HMRWHKTGKS KAIYNNGVKK GWKKILVLYK TPQRGGRPER APWVMHQYHL GEEEDEKDGE  120
LVLSKVFYQL PTKHKENAEA ETDDEEPDAF AAGIGPKTPK TNTPQPRRAN NSPCETEHNA  180
SILLDQDEEL TIPIVGPDDD DVGNHALCTG ETQIVGEALR AQPSLDESLL CLEDPEIQFG  240
SQESIGSWLD RI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14347RKRRR
24448KRRRV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015688975.11e-100PREDICTED: NAC domain-containing protein 73
TrEMBLA0A3L6QEE71e-105A0A3L6QEE7_PANMI; NAC domain-containing protein 73-like
STRINGPavir.Aa01341.1.p1e-107(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21103799