PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00324.1.g00240.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 353aa    MW: 36526.1 Da    PI: 10.4566
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00324.1.g00240.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like35.81.7e-11253277226
                       G2-like   2 prlrWtpeLHerFveaveqLGGsek 26 
                                   pr+rWt++LH+rFv+ave LGG+e+
  Zmw_sc00324.1.g00240.1.am.mk 253 PRMRWTSTLHARFVHAVELLGGHER 277
                                   9*********************997 PP

2G2-like38.42.8e-123183422751
                       G2-like  27 AtPktilelmkvkgLtlehvkSHLQ 51 
                                   AtPk++l+lm+vk+Ltl+hvkSHLQ
  Zmw_sc00324.1.g00240.1.am.mk 318 ATPKSVLQLMDVKDLTLAHVKSHLQ 342
                                   9************************ PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.7E-23251277IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.7E-23318342IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-7318342IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MEATASAPDL SLHISLPSGN AASPSSAPGL GAGGVVGGRG AAGSPGGDPW RRLNGSTAST  60
ELSLSPPQRQ QEGPASALPW RLWPSTAANA PSSSSSASSA EAAAFLPVTV PGLSLDAAAS  120
AEAARGPPIN GVPVYSSPGA GSSPFLGADD YRQRQPKVGL YNPYPSSAWP SSLRSTTAAV  180
LAPVDTTTAA FHHSPSAYHR MLSGTGRLQL HGALADTLRG YGAGHQQYFG SSLASSRYVP  240
RLPAASRRCM RAPRMRWTST LHARFVHAVE LLGGHEREWS PPAGQFLGNL GSLHARVTRS  300
AKLLRLISLS PYVHGPGATP KSVLQLMDVK DLTLAHVKSH LQASELSPPA EVL
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that regulates abaxial identity during leaf development. {ECO:0000269|PubMed:18594992}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025820100.19e-94probable transcription factor RL9 isoform X2
SwissprotQ0J2357e-42ROLL9_ORYSJ; Probable transcription factor RL9
TrEMBLA0A3L6RKZ81e-99A0A3L6RKZ8_PANMI; Putative transcription factor RL9
STRINGPavir.Fb00812.1.p4e-98(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25583787