PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00293.1.g00090.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 904aa    MW: 96285.9 Da    PI: 12.0168
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00293.1.g00090.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.3e-20715766156
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                   ++y+GVr ++ +gr++AeIrdp    k+ r++lg+++taeeAa+a++aa+++++g+
  Zmw_sc00293.1.g00090.1.am.mk 715 PHYRGVRKRP-WGRFAAEIRDPA---KKSRVWLGTYDTAEEAARAYDAAAREYRGA 766
                                   68********.**********83...36**************************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.7E-14715765IPR001471AP2/ERF domain
CDDcd000181.15E-14715773No hitNo description
SuperFamilySSF541715.1E-22716774IPR016177DNA-binding domain
SMARTSM003802.4E-37716779IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-31716773IPR001471AP2/ERF domain
PROSITE profilePS5103224.302716773IPR001471AP2/ERF domain
PRINTSPR003673.8E-10717728IPR001471AP2/ERF domain
PRINTSPR003673.8E-10739755IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 904 aa     Download sequence    Send to blast
MTHHDPSLLL PPLPRRIPTP HAAAVTVAIH QQHHATTRQV NTGVPSAARP HALTPRRSRS  60
RTIPRSFLSS RCPAEPTRTA GPNESGQYTD RPGRNHARGG RHTRSAESGS EFCKTASSAR  120
PKRPPLVAAA AAPGIQKLRR SRKNRASRTA PAHHTTTILP RPENSDKIWR GGTYTTPPPA  180
AVAVAPSQVR GLSLSTFPRC ARIIPRPDES RDPAAIRPAG RAPRWRACVH GARPALPASP  240
GGAVSGAAWC VDGGAQSAGL DTALPNPLPP HERSSVSYRR VPDSMLSSAT EVHAPLAITN  300
GQAGGARPCQ VPRRSAWDAR RRARHPVTQD AKERQRRERA VEWRCVGTAR MRRHSHPPRP  360
QAEYVRTPVA TGAWRCPRAL SVQSPPRMRG RPRGAGTVVG GGYAIRSGRS ERARSRRMPT  420
LGRPHRLERT GRLVTCRRQL QPPPTLRGDY GPSGGRAGGF IGLRSCVCVS VVHWTSRTHL  480
LARADDAVGD TIRVTATRGA GRTEGGDGRR MPVILLRAHA SGDGRRLVGL GSVGCPHCGE  540
TAARDARIVM PPRSSRRAHD ARDVLPQRAA RRAPRVSFPI ETAPDAAQFA ARQGVEWEKA  600
PRGTVKCRHA KHEARRRGGD SQSARSLTAP SFIPCGRSTT RAALTASPPF LTRPSSSPRY  660
KSSPGLPPNP RHLPSTRERN NTATMAPRTS EKTTQPATAA TGLALGVGCG GAGGPHYRGV  720
RKRPWGRFAA EIRDPAKKSR VWLGTYDTAE EAARAYDAAA REYRGAKAKT NFPFLSSSSP  780
APVAVTGGGT GSGSSNSSTV ESFGCDVQAP PMQAMPLPPS LELDLFSRGA GAVRFPFTGY  840
PAAAAAGCHV LKLAPTVTVA AVAQSDSDSS SVVDLAPSPP AVSAQKTVAF DLDLNCPPPT  900
EAEA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-21712778168ATERF1
3gcc_A3e-21712778168ATERF1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1333338RQRRER
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38463174