PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00203.1.g00010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 229aa    MW: 24613.1 Da    PI: 10.4043
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00203.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM85.21.3e-26138228190
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL.pkkvkaeekew.yfFskrdkkyatgkrknratk 79 
                                   lppG rF+P deel+++yL++k+++  +    +++evd+yk+ePwdL p++ +++++ + yfF+ r+ k a+g r+nrat 
  Zmw_sc00203.1.g00010.1.am.mk 138 LPPGSRFRPMDEELLTHYLTRKAANVGFAS-AAVREVDLYKAEPWDLlPAARAGDDDGCrYFFCARRVKFASGLRTNRATP 217
                                   79*************************988.78*************95543334445555********************* PP

                           NAM  80 sgyWkatgkdk 90 
                                   +gyWk+tgkdk
  Zmw_sc00203.1.g00010.1.am.mk 218 AGYWKSTGKDK 228
                                   *********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-29134228IPR003441NAC domain
PROSITE profilePS5100531.461138229IPR003441NAC domain
PfamPF023652.8E-13139228IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
DSGGATFRPA GALAPSPLDR LQLLPAIINC FALLARYPPS APPPVTARRT HLGKTPKPPA  60
APGSHRIMHA SSVSIKPIHT QVSSSDMERA QGSQSLAQQA CAFAATRDGQ LPANTNTQMR  120
VPCIGTGNHP RDRPCTGLPP GSRFRPMDEE LLTHYLTRKA ANVGFASAAV REVDLYKAEP  180
WDLLPAARAG DDDGCRYFFC ARRVKFASGL RTNRATPAGY WKSTGKDKV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-2113822917106NO APICAL MERISTEM PROTEIN
1ut4_B1e-2113822917106NO APICAL MERISTEM PROTEIN
1ut7_A1e-2113822917106NO APICAL MERISTEM PROTEIN
1ut7_B1e-2113822917106NO APICAL MERISTEM PROTEIN
3swm_A1e-2113822920109NAC domain-containing protein 19
3swm_B1e-2113822920109NAC domain-containing protein 19
3swm_C1e-2113822920109NAC domain-containing protein 19
3swm_D1e-2113822920109NAC domain-containing protein 19
3swp_A1e-2113822920109NAC domain-containing protein 19
3swp_B1e-2113822920109NAC domain-containing protein 19
3swp_C1e-2113822920109NAC domain-containing protein 19
3swp_D1e-2113822920109NAC domain-containing protein 19
4dul_A1e-2113822917106NAC domain-containing protein 19
4dul_B1e-2113822917106NAC domain-containing protein 19
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2313956