PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00148.1.g00350.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GeBP
Protein Properties Length: 435aa    MW: 46297.7 Da    PI: 6.1953
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00148.1.g00350.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57330.31.2e-0975105232
                        DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsd 32 
                                   lfqrlw++eDeiv+L+++ +f+a++g+   +
  Zmw_sc00148.1.g00350.1.am.mk  75 LFQRLWTDEDEIVILRAFAEFTAQRGTAFAS 105
                                   69************************95444 PP

2DUF57398.75.5e-31128226397
                        DUF573   3 fqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkeps 79 
                                   ++rlw++eDeiv+L+++ +f+a++g+   +++ d++ fye ++++++  ++ksqlveK+rrLK+K++++v++ +  g ++s
  Zmw_sc00148.1.g00350.1.am.mk 128 PRRLWTDEDEIVILRAFAEFTAQRGTafASHQyDTTPFYEDMRGRLQTGFTKSQLVEKLRRLKRKYRNCVDRlRVAGPSFS 208
                                   68************************9977778***************************************88899**** PP

                        DUF573  80 fskehdqkifelskkiWg 97 
                                   f+++h+q ife+++ iW+
  Zmw_sc00148.1.g00350.1.am.mk 209 FRSPHEQAIFEIARTIWR 226
                                   *****************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.4E-28129225IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MFPMVDDPSA AAGGGAMVSS SFPDADAYGN GNGDSEDIDF PAGPNSHASF SAAPATTAAT  60
SAGAGGPGSG ERRALFQRLW TDEDEIVILR AFAEFTAQRG TAFASHQTCA AASRPGSPRA  120
SSXXXXRPRR LWTDEDEIVI LRAFAEFTAQ RGTAFASHQY DTTPFYEDMR GRLQTGFTKS  180
QLVEKLRRLK RKYRNCVDRL RVAGPSFSFR SPHEQAIFEI ARTIWRPGSD KHGRDSDDEG  240
NEDALAVDAA AAAAAAAAGA RVNGDSARSP SSRSRRGRRR RKGDFPATDT AEALPPAPMP  300
AMTTEDALPS FPQPTAMDGG TITMDPAAAG LPAVLSAAAT VATPGTAENP ILASLFKEMI  360
RSMLNISSSS APLGLEPPPP AIPGMPMDGE KWRQQRILEL EVYLRRIALL QDQAQAALEE  420
LRSAPPHHGA GGMNT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025794014.11e-146probable transcription factor At3g04930
TrEMBLA0A2T7CC961e-144A0A2T7CC96_9POAL; Uncharacterized protein
TrEMBLA0A2T8I4R31e-144A0A2T8I4R3_9POAL; Uncharacterized protein
STRINGGRMZM2G026417_P011e-141(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123