PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00147.1.g00210.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 259aa    MW: 28941.1 Da    PI: 9.6126
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00147.1.g00210.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM110.81.5e-34151431128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   l+pG++F+P d++lvv+yL+ ++ + +l+   +i++ di++++P+dL     ++ +e +fF +r  ++++++r +r++k+g
  Zmw_sc00147.1.g00210.1.sm.mk  15 LAPGYKFNPADQDLVVRYLRCRAVNYQLSS-AIIADKDILDHHPSDLV---PETGSEKFFFYRRVLRSENDTRWKRTAKHG 91 
                                   579************************999.78**************5...34567999********************** PP

                           NAM  82 yWkatgkdkevlsk..kgel.....vglkktLvfykgrapkgektdWvmheyrl 128
                                   yW+a+gk+ +++++  +        vg+k+tLvfy+g+ p+ge+tdWvm ey l
  Zmw_sc00147.1.g00210.1.sm.mk  92 YWRASGKEVPIFCTsvS--SgvplmVGIKRTLVFYHGKPPSGERTDWVMREYCL 143
                                   *************7441..356788***************************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-3512153IPR003441NAC domain
PROSITE profilePS5100536.41315211IPR003441NAC domain
PfamPF023651.5E-1717143IPR003441NAC domain
SuperFamilySSF1019412.62E-35199211IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MAASIPLASG VTIPLAPGYK FNPADQDLVV RYLRCRAVNY QLSSAIIADK DILDHHPSDL  60
VPETGSEKFF FYRRVLRSEN DTRWKRTAKH GYWRASGKEV PIFCTSVSSG VPLMVGIKRT  120
LVFYHGKPPS GERTDWVMRE YCLAGGGLSP YRMMWPCMKN NSGHINGTVK VTSKEHYDPS  180
VTPHITAPSI ENVNIMVNPD SSWVICRIHK KKARKPTIII RANNNAGVEK IRFYDFLGQG  240
NHDDGTASSS ATPMENSEV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-201514315140Stress-induced transcription factor NAC1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44822369