PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00120.1.g00240.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 534aa    MW: 58812.8 Da    PI: 10.6349
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00120.1.g00240.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM154.35.4e-4851381128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratk 79 
                                   +ppGfrFhP+d+elv +yL +k++g+ +    v +++vd++k+ePwdLp +++ +e +ewyfFs  d+ky+tg+r+nrat+
  Zmw_sc00120.1.g00240.1.am.mk   5 MPPGFRFHPRDDELVLDYLLPKLSGHCHARGGVaMADVDVNKCEPWDLPeECCVSEGNEWYFFSLPDRKYTTGERTNRATR 85 
                                   79************************97776777***************667778899*********************** PP

                           NAM  80 sgyWkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   sgyWkatgkd++  +k      +lvg +ktLvfy+grap+g+kt Wvmhe+r+
  Zmw_sc00120.1.g00240.1.am.mk  86 SGYWKATGKDRAADDKtvktPATLVGRRKTLVFYTGRAPNGRKTAWVMHEFRV 138
                                   *********999888744434555***************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-523160IPR003441NAC domain
PROSITE profilePS5100552.9055160IPR003441NAC domain
PfamPF023651.1E-246138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 534 aa     Download sequence    Send to blast
METRMPPGFR FHPRDDELVL DYLLPKLSGH CHARGGVAMA DVDVNKCEPW DLPEECCVSE  60
GNEWYFFSLP DRKYTTGERT NRATRSGYWK ATGKDRAADD KTVKTPATLV GRRKTLVFYT  120
GRAPNGRKTA WVMHEFRVEL PSPPRLGREG NWVLCRVLYK SGTTTPRPAS KDQAGMPTSC  180
EPDLPVTAPP VIAAFNAIDG SRTAAEQVSC FSGLPALPFR RPVSRGDGHA MGISEKQAMG  240
IMSKNSSSQG PEKDSSSPAL RSTASRIAVS MHSSGTTLMS TWRHSVGSST TTRRHALQTT  300
SAQNTMSRAS SLRKTSCRAS LGSAAQSLAS GGREDGEGRF LVRRLQEENI AARVLNLGLK  360
ERYKYENNDR CSQNRRVLSP EERRAGEEER SLRQDPTNSM VVRAAGWVGS LEITECIRQQ  420
LRSISNGSFG WMKRPRSPPR PLQRVEAPEL MQEPSSPPLN DGSTRSTRAA AKLPALLRAV  480
PARHKPHRAA PPRCHIRPPT CLAPRAPTQI VNVGHFLVVF NLQLLSLSLS LPSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A1e-37516320171NAC domain-containing protein 19
3swm_B1e-37516320171NAC domain-containing protein 19
3swm_C1e-37516320171NAC domain-containing protein 19
3swm_D1e-37516320171NAC domain-containing protein 19
3swp_A1e-37516320171NAC domain-containing protein 19
3swp_B1e-37516320171NAC domain-containing protein 19
3swp_C1e-37516320171NAC domain-containing protein 19
3swp_D1e-37516320171NAC domain-containing protein 19
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP6914822