PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00028.1.g00160.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 128aa    MW: 14117.7 Da    PI: 9.4501
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00028.1.g00160.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-191667155
                           AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                                  ++y+GVr+++ +g+++AeIrd      ++ r++lg+f taeeAa+a+++a+  ++g
  Zmw_sc00028.1.g00160.1.am.mk 16 TKYRGVRRRP-SGKFAAEIRDS---RrQSERIWLGTFNTAEEAARAYDRAAYIMRG 67
                                  69********.7*********3...2345***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.76E-181675No hitNo description
PfamPF008471.6E-141667IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-221775IPR016177DNA-binding domain
SMARTSM003801.6E-311781IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.5E-301775IPR001471AP2/ERF domain
PROSITE profilePS5103222.4051775IPR001471AP2/ERF domain
PRINTSPR003678.0E-101829IPR001471AP2/ERF domain
PRINTSPR003678.0E-104157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
MEGSACEHGK DSIEVTKYRG VRRRPSGKFA AEIRDSRRQS ERIWLGTFNT AEEAARAYDR  60
AAYIMRGQLA VLNFPGEAHN YVRGSSSSQQ PQQGAGGGGS GRRAIELEYL DDKVLQDLLL  120
KGDDGKKV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-3231147114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022683705.11e-50ethylene-responsive transcription factor ERF098-like
SwissprotQ9LSX02e-32ERF96_ARATH; Ethylene-responsive transcription factor ERF096
TrEMBLA0A368RRP43e-49A0A368RRP4_SETIT; Uncharacterized protein
TrEMBLA0A3L6RM424e-49A0A3L6RM42_PANMI; Uncharacterized protein
STRINGSi011941m1e-47(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Publications ? help Back to Top
  1. Zander M,Thurow C,Gatz C
    TGA Transcription Factors Activate the Salicylic Acid-Suppressible Branch of the Ethylene-Induced Defense Program by Regulating ORA59 Expression.
    Plant Physiol., 2014. 165(4): p. 1671-1683
    [PMID:24989234]