PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma135g00370.1
Common NameZOSMA_135G00370
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family GeBP
Protein Properties Length: 396aa    MW: 43513.5 Da    PI: 7.2777
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma135g00370.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57369.76.1e-22113208297
            DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfs.kehdqkifelsk 93 
                       +f+r+wse De+ +LqGl+ +  ++g     d++ f++ +++ +   +++sql+eK+rr++kKf+   +++++g +ps + ++hd++ +els 
  Zosma135g00370.1 113 KFHRIWSELDEMRFLQGLLAC-GSQGLVFPRDLNVFFDRFSETMTQPYTRSQLSEKLRRFRKKFRVVCSRVARGLDPSTAlSAHDRDLYELST 204
                       699******************.667888888*********************************************9875389********** PP

            DUF573  94 kiWg 97 
                       ++W+
  Zosma135g00370.1 205 QLWH 208
                       ***7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.0E-22114208IPR007592Protein of unknown function DUF573
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MATPPSATPT TSSQHEPHLH IKSAARKLPI KRNPNHNNNP NNHHPNHTPS AAAFSIIVDD  60
GDGGIDQDVV YEEGDEEECY EDDFNSMAVT VFGGGGGGGG GVQLQNSLPA PFKFHRIWSE  120
LDEMRFLQGL LACGSQGLVF PRDLNVFFDR FSETMTQPYT RSQLSEKLRR FRKKFRVVCS  180
RVARGLDPST ALSAHDRDLY ELSTQLWHPS CSDSSPFAQS GPDATKRRKR LPPPPQTPHT  240
PHTPVINKFT IENFIQNSFK PSSSPPLSGR DDKRNVLSLG RESKVVQKAS FGDIESFKAM  300
VAKAILDSFD NSVKELKQDL NKTSAAASTT TTTTCTSSLF LQVNKTSGSG GDLADRWQEQ  360
LAAEFDVHCS RLSQSGLRTI DHHDTLSFLV HHACG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029121387.15e-53undifferentiated embryonic cell transcription factor 1-like
TrEMBLA0A0K9PYK10.0A0A0K9PYK1_ZOSMR; DNA-binding storekeeper protein-related transcriptional regulator
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86953243
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.12e-08DNA-binding storekeeper protein-related transcriptional regulator