PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM5G884349_P01
Common NameZEAMMB73_439931
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 263aa    MW: 29397.4 Da    PI: 6.8716
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM5G884349_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_174.61.3e-23180239160
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                        e+elkrerrkq+NRe+ArrsR+RK++e+eeL++kv  L+  N +L++el+elkk ++ ++
  GRMZM5G884349_P01 180 ERELKRERRKQSNRESARRSRLRKQQECEELAQKVTDLTVVNGMLRSELDELKKACEDME 239
                        89*******************************************************886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF050424.5E-65076IPR007736Caleosin-related
Gene3DG3DSA:1.20.5.1701.1E-18174242No hitNo description
SMARTSM003383.9E-18180244IPR004827Basic-leucine zipper domain
PfamPF001701.8E-21180239IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.863182245IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.88E-11183238No hitNo description
CDDcd147021.83E-19185235No hitNo description
PROSITE patternPS000360187202IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000037anatomyshoot apex
PO:0006339anatomyjuvenile vascular leaf
PO:0006340anatomyadult vascular leaf
PO:0006341anatomyprimary shoot system
PO:0006354anatomyear floret
PO:0006505anatomycentral spike of ear inflorescence
PO:0008018anatomytransition vascular leaf
PO:0009001anatomyfruit
PO:0009009anatomyplant embryo
PO:0009025anatomyvascular leaf
PO:0009054anatomyinflorescence bract
PO:0009074anatomystyle
PO:0009089anatomyendosperm
PO:0020040anatomyleaf base
PO:0020104anatomyleaf sheath
PO:0020126anatomytassel inflorescence
PO:0020127anatomyprimary root
PO:0020136anatomyear inflorescence
PO:0020142anatomystem internode
PO:0020148anatomyshoot apical meristem
PO:0025142anatomyleaf tip
PO:0025287anatomyseedling coleoptile
PO:0001007developmental stagepollen development stage
PO:0001009developmental stageD pollen mother cell meiosis stage
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0001083developmental stageinflorescence development stage
PO:0001095developmental stageplant embryo true leaf formation stage
PO:0001180developmental stageplant proembryo stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
PO:0007015developmental stageradicle emergence stage
PO:0007016developmental stagewhole plant flowering stage
PO:0007022developmental stageseed imbibition stage
PO:0007026developmental stageFL.00 first flower(s) open stage
PO:0007031developmental stagemid whole plant fruit ripening stage
PO:0007032developmental stagewhole plant fruit formation stage up to 10%
PO:0007045developmental stagecoleoptile emergence stage
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007065developmental stageLP.05 five leaves visible stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007094developmental stageLP.01 one leaf visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007104developmental stageLP.15 fifteen leaves visible stage
PO:0007106developmental stageLP.03 three leaves visible stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
PO:0007123developmental stageLP.06 six leaves visible stage
PO:0007633developmental stageendosperm development stage
PO:0021004developmental stageinflorescence initiation stage
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MRMWHVLRGA IVALVTVVLL SMLGPGSNDR VVEVEGSSSS SMADVYKGEL TPLKRHIAFF  60
DCNKDDAIYP SETYQDGICF HLETGFLNGL LENSFHVSFK LVGNYQKQRD SSAWNRAEQK  120
CLKGIDVIIY AIQDNIVRPN LNIGMDLWTD SPVKAETSGQ GEINAATHSH HGSTLSMMDE  180
RELKRERRKQ SNRESARRSR LRKQQECEEL AQKVTDLTVV NGMLRSELDE LKKACEDMEA  240
VTSMVIKTAL VAMGSGRLTQ GSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1196202RRSRLRK
2196203RRSRLRKQ
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM5G884349
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM5G884349_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY6852071e-165AY685207.1 Zea mays ABRE-binding factor Embp-2 mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008662730.18e-98DNA-binding protein EMBP-1
TrEMBLA0A1D6IYI81e-143A0A1D6IYI8_MAIZE; Putative bZIP transcription factor superfamily protein
STRINGGRMZM5G884349_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Representative plantOGRP7001767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32150.19e-24basic region/leucine zipper transcription factor 68