PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G465091_P01
Common NameTCP14, ZEAMMB73_610384
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family TCP
Protein Properties Length: 207aa    MW: 21010.9 Da    PI: 10.5997
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G465091_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP109.45.2e-3445149989
                TCP   9 skihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.seceaesssssasnsssg........... 88 
                        +++h+kv+gR+RRvR+++ caar+F+L++eLG+++d++tieWLl+qa+p+i ++tg+++++a  +c+++ s s+as   +g           
  GRMZM2G465091_P01  45 KDRHSKVNGRGRRVRMPIVCAARVFQLTRELGLKSDGQTIEWLLRQAEPSILAATGSGTTPAvFSCSSAPSTSAAS---AGagagvslpllg 133
                        89*******************************************************9999944552222222222...2222344555555 PP

                TCP  89 ...............k 89 
                                       +
  GRMZM2G465091_P01 134 krpreehepavavavA 149
                        5544444455555441 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136927.0094498IPR017887Transcription factor TCP subgroup
PfamPF036347.2E-3044122IPR005333Transcription factor, TCP
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006340anatomyadult vascular leaf
PO:0009001anatomyfruit
PO:0009025anatomyvascular leaf
PO:0009089anatomyendosperm
PO:0020040anatomyleaf base
PO:0025142anatomyleaf tip
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0001095developmental stageplant embryo true leaf formation stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007003developmental stageIL.03 full inflorescence length reached stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
PO:0007633developmental stageendosperm development stage
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MASRDGATFQ VYRAMPAPTP MSLASAAPAA ADAAAPKKAG AGAGKDRHSK VNGRGRRVRM  60
PIVCAARVFQ LTRELGLKSD GQTIEWLLRQ AEPSILAATG SGTTPAVFSC SSAPSTSAAS  120
AGAGAGVSLP LLGKRPREEH EPAVAVAVAP APFWATLQAR PVAAAWGLSP AQEAAAQAYA  180
SVAAQGHHLN LLSVLSGAAR PSEEESR
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G465091
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G465091_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7276960.0KJ727696.1 Zea mays clone pUT5635 TCP transcription factor (TCP14) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008663394.31e-142transcription factor PCF1
SwissprotQ9FMX25e-39TCP7_ARATH; Transcription factor TCP7
TrEMBLK7TM601e-142K7TM60_MAIZE; TCP transcription factor
STRINGGRMZM2G465091_P011e-143(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP194133100
Representative plantOGRP9221459
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.19e-35TCP family protein