PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G451771_P01
Common NameZEAMMB73_753276
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family Dof
Protein Properties Length: 245aa    MW: 24946.9 Da    PI: 9.0169
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G451771_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof91.76.1e-2986138560
             zf-Dof   5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 
                          +cprC s++tkfCyyn   +sqPr+f +aCrryWt GG+lrnvP+Gg++rk+ +
  GRMZM2G451771_P01  86 GEQCPRCASHDTKFCYYN---TSQPRHFYRACRRYWTLGGSLRNVPIGGSTRKRPR 138
                        579*************87...79*****************************9865 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088421.62387138IPR003851Zinc finger, Dof-type
PfamPF027011.6E-2487136IPR003851Zinc finger, Dof-type
ProDomPD0074783.0E-1888131IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MASFVPLLHN ACKHDVRHHL NTMPATWSGS TTNNVSATGA MAAATFGSTS NSNAAPSGAT  60
DMASYLQQLQ DIAAAKSSGG GGAARGEQCP RCASHDTKFC YYNTSQPRHF YRACRRYWTL  120
GGSLRNVPIG GSTRKRPRLG QGGGGLLGSM FALGAAGLLL EGRGAGSSFD FDFDLGLGLP  180
TGPLHLGAGA GAGAGEAAAL QMQGLGLRGG GSAAGSSAFL WPAGAGMLVD NDSVDTWKLH  240
RVSDA
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G451771
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G451771_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC5824064e-54KC582406.1 Sorghum bicolor dof9 protein (dof9) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020401001.11e-138LOW QUALITY PROTEIN: dof zinc finger protein DOF1.6
TrEMBLK7UGC91e-175K7UGC9_MAIZE; Dof zinc finger protein DOF1.6
STRINGGRMZM2G451771_P011e-176(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP14037367
Representative plantOGRP3817445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21340.13e-21Dof family protein