PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G417164_P01
Common NamebHLH82, LOC103635442, ZEAMMB73_537276
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bHLH
Protein Properties Length: 219aa    MW: 23985.5 Da    PI: 8.5098
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G417164_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.2e-12250455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       +h ++Er+RR+++N+ +  Lr+l P +   + k+ + a+i   A+e+Ik+Lq
  GRMZM2G417164_P01  2 SHIAVERNRRRQMNEHLKVLRSLTPGL---YIKRGDQASIIGGAIEFIKELQ 50
                       89*************************...9********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.58E-12154No hitNo description
PROSITE profilePS5088815.135149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.4E-16168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-13261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.5E-10250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.1E-12455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009913Biological Processepidermal cell differentiation
GO:0010374Biological Processstomatal complex development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MSHIAVERNR RRQMNEHLKV LRSLTPGLYI KRGDQASIIG GAIEFIKELQ QVLESLEARK  60
KRRSSGGGHS FLTGSPSPTP SPRSHLLSSV STPSPPVMIK ELAACCNSAV ADVEAKISGS  120
NVLLRTLSRR SSIPGRQAVR LIAVLEGLHL EVLHLNISTM EDTVLHSLVL KIGLECQLSV  180
EDLAYEVQQI FGQDTAEQKP QEENHNQHII YSSAMAAAI
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G417164
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G417164_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7269690.0KJ726969.1 Zea mays clone pUT3670 bHLH transcription factor (bHLH82) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008656121.11e-159PREDICTED: transcription factor MUTE
SwissprotQ9M8K69e-70MUTE_ARATH; Transcription factor MUTE
TrEMBLK7V1X71e-159K7V1X7_MAIZE; BHLH transcription factor
STRINGGRMZM2G417164_P011e-158(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP25315131
MonocotsOGMP111443441
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.15e-61bHLH family protein