PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G380897_P01
Common NameZEAMMB73_499635
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 232aa    MW: 26450.2 Da    PI: 7.6474
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G380897_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.21.3e-061371581334
                        HHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  13 NReAArrsRqRKkaeieeLeek 34 
                        NReAAr+s +RKka+i++Le  
  GRMZM2G380897_P01 137 NREAARKSLLRKKAYIQQLESC 158
                        *******************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF126783.2E-105993IPR024766Zinc finger, RING-H2-type
SuperFamilySSF578505.65E-1261103No hitNo description
CDDcd001623.59E-46193No hitNo description
Gene3DG3DSA:3.30.40.102.0E-116197IPR013083Zinc finger, RING/FYVE/PHD-type
Gene3DG3DSA:1.20.5.1704.4E-5137177No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MDDDGGAFPS TSASAASRSL RRWFPFDPSP LPLVGPLLLV VVQELQRDTD SPTSKARIKY  60
DEENLRSITK CEHHFHLCCI LEWMERKDTC PVCDQNMATK FHTKSWQHTR FKGLFSIAYC  120
SYIFTVIHIS HGAAAYNREA ARKSLLRKKA YIQQLESCRL KLSQMEQDMQ RACSQARFLL  180
LLFLCLLNCN RTPEGKDECG RATVEECVSI AGDDRFLDHI HWEGAGSKDQ SA
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.1185644e-54meristem| ovary| root
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G380897
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G380897_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0648869e-52BT064886.1 Zea mays full-length cDNA clone ZM_BFb0326H15 mRNA, complete cds.
GenBankBT0873979e-52BT087397.1 Zea mays full-length cDNA clone ZM_BFb0061G14 mRNA, complete cds.
GenBankEU9582609e-52EU958260.1 Zea mays clone 1681933 RHB1A mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGGRMZM2G380897_P011e-175(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.33e-14bZIP family protein