PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G354618_P01
Common NamebHLH85, ZEAMMB73_795844, Zm.2720
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bHLH
Protein Properties Length: 288aa    MW: 31191.9 Da    PI: 7.4117
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G354618_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.22.9e-08167208854
                        HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        + r RR+ri ++   L++l+P       +K++ a++L +A++YIk L
  GRMZM2G354618_P01 167 VARHRRERISERVRVLQRLVPGG-----TKMDTASMLDEAIRYIKFL 208
                        5699*****************87.....8****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.90E-11150213No hitNo description
PROSITE profilePS5088815.11159208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-14164217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-13165217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-13165214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-5168208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010197Biological Processpolar nucleus fusion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MNNITQHNSS SSSSWDLDMS LGTHHHPLLF DSHPNPGPPP PPLPFHPSSS HHPPPHPAHH  60
HPGLGPSLSS SLFPQPPHHH HHRLHRLGLD IDDPSSQSHG HRGNDELEEE MRKQHEAAAE  120
HVDEELGAMK EMMYRIAAMQ PVDIDPATVK KPRRRNVRIS EDPQSVVARH RRERISERVR  180
VLQRLVPGGT KMDTASMLDE AIRYIKFLKR QVQELQHPAP AAAGAGAGPS VSAVGGLPLI  240
DWAGLVRPVD IHGPTSPSSS SSMGGAGAHA ALGFGFSSAG GQSSHGMH
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.27201e-164embryo
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G354618
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G354618_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7269700.0KJ726970.1 Zea mays clone pUT3671 bHLH transcription factor (bHLH85) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008678338.10.0PREDICTED: transcription factor IND-like
TrEMBLK7USL10.0K7USL1_MAIZE; BHLH transcription factor
STRINGGRMZM2G354618_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP7611568
MonocotsOGMP90513246
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09750.12e-40bHLH family protein