PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G301089_P02
Common NamebHLH103, Zm.11891
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bHLH
Protein Properties Length: 272aa    MW: 29460.1 Da    PI: 6.4048
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G301089_P02genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.45.3e-08130174554
                        HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        h +rEr+RR+++ ++++ L  l+  +      + +K +i++ A  YI++L
  GRMZM2G301089_P02 130 HMMRERQRREKLSQSYADLHALVAAR-----SRGDKNSIVQAAAVYIHEL 174
                        889**********************7.....5888889*********998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.693125174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.27E-12125193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.6E-10129192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.14E-8129175No hitNo description
PfamPF000102.0E-5130174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.6E-5131180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0046983Molecular Functionprotein dimerization activity
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0004006anatomymesophyll cell
PO:0025589anatomyleaf lamina tip
PO:0007106developmental stageLP.03 three leaves visible stage
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MQMDSYNYNY ASFFHDEAPS FYPHVAVPPS PELPIGLIAS PGEPEPPFAP PMPASFQDYT  60
GAVGVGVGVR APFGGASVHG QAIDALGGGD GQREQSMAMA EDGEEPAPRR RQPAGGPAAA  120
AVESSRGFRH MMRERQRREK LSQSYADLHA LVAARSRGDK NSIVQAAAVY IHELRGARDQ  180
LQRRNEELKA RILGHDAGQQ CVKVQFEVDE PASAIDSMIG ALRRLKGMDV RARGIRSSLS  240
GRRLWTEMNV ETTVSSTLAI LVESSLCFAD ND
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.118910.0ovary
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G301089
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G301089_P02
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7267930.0KJ726793.1 Zea mays clone pUT2279 bHLH transcription factor (bHLH103) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001147499.10.0helix-loop-helix DNA-binding domain containing protein
SwissprotQ75KV93e-89BH148_ORYSJ; Transcription factor BHLH148
TrEMBLA0A060D4N10.0A0A060D4N1_MAIZE; BHLH transcription factor (Fragment)
STRINGGRMZM2G301089_P010.0(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.12e-17bHLH family protein