PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G177046_P01
Common NameLOC103644073
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 185aa    MW: 20188.1 Da    PI: 11.0951
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G177046_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.82e-1268121154
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                        e++l+r+rrk +NR++A+rsR+RK++++eeL+e ++ L ae ++L  +l+ l  
  GRMZM2G177046_P01  68 EERLRRQRRKVSNRLSAQRSRARKQQRLEELREAAARLRAEKQQLEARLQALAR 121
                        789**********************************************99975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.9E-1063121No hitNo description
SMARTSM003389.5E-868132IPR004827Basic-leucine zipper domain
PfamPF001704.2E-868120IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.00170133IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.03E-771123No hitNo description
CDDcd147021.83E-1173122No hitNo description
PROSITE patternPS0003607590IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MLSVQEALDL ASSSCGTMDI TTCGFTPWGP ESCPSLEQVM ASRPAASSTA ALAEAEAEAA  60
RDADPEDEER LRRQRRKVSN RLSAQRSRAR KQQRLEELRE AAARLRAEKQ QLEARLQALA  120
RHDLAVRCQN ARLGAEASAL ARRFREARRL LALRRLAFAA LQPRPGVAPA PAPPAPLLGL  180
ASLMT
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G177046
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G177046_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9576761e-164EU957676.1 Zea mays clone 1603335 ocs element-binding factor 1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008665488.11e-123ocs element-binding factor 1-like
TrEMBLA0A1D6L6611e-121A0A1D6L661_MAIZE; Ocs element-binding factor 1
STRINGGRMZM2G177046_P011e-122(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP138452429
Representative plantOGRP1264445