PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G171912_P02
Common NameZEAMMB73_753689
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 193aa    MW: 20329.3 Da    PI: 10.7826
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G171912_P02genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.17e-12103163262
                        XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                        ke  r +r+ +NR++A+  R+RKka++ eLe ++k Le  N +L +++++l++e  +l++ 
  GRMZM2G171912_P02 103 KEQNRLKRLLRNRVSAQQARERKKAYLTELEARAKDLELRNAELEQRVSTLQNENNTLRQI 163
                        78899***************************************************99986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.0E-13102166IPR004827Basic-leucine zipper domain
PfamPF001702.1E-10103164IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.162104167IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.56E-11107164No hitNo description
CDDcd147042.48E-14107157No hitNo description
Gene3DG3DSA:1.20.5.1705.0E-16107166No hitNo description
PROSITE patternPS000360109124IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MAAQEQEHEK QQAKTSTTSS LPSSSERSSS SAPNNLREGA EAAGAGVESD EEIRRVPELG  60
GASASASASS GAGKEDGARA VAAGAQGHPP AAGKKRGRAP GDKEQNRLKR LLRNRVSAQQ  120
ARERKKAYLT ELEARAKDLE LRNAELEQRV STLQNENNTL RQILKNTTAH ASKRSGGGGK  180
GGDGGKKHHF AKS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19298GKKRGRA
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.859641e-129ear| endosperm| meristem| shoot| tassel
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G171912
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light-induced genes. {ECO:0000269|PubMed:15178762}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G171912_P02
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0179371e-138BT017937.1 Zea mays clone EL01N0520G04.c mRNA sequence.
GenBankEU9766421e-138EU976642.1 Zea mays clone 986002 transcription factor HY5 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008655674.12e-91transcription factor HY5
SwissprotQ9SM505e-47HY5_SOLLC; Transcription factor HY5
TrEMBLA0A3L6DNP94e-90A0A3L6DNP9_MAIZE; Transcription factor HY5
TrEMBLK7VQH04e-90K7VQH0_MAIZE; Putative bZIP transcription factor superfamily protein
STRINGGRMZM2G171912_P021e-132(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP140838111
Representative plantOGRP20811737
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.12e-34bZIP family protein
Publications ? help Back to Top
  1. Wang F, et al.
    Light Signaling-Dependent Regulation of Photoinhibition and Photoprotection in Tomato.
    Plant Physiol., 2018. 176(2): p. 1311-1326
    [PMID:29146776]
  2. Liu CC, et al.
    The bZip transcription factor HY5 mediates CRY1a-induced anthocyanin biosynthesis in tomato.
    Plant Cell Environ., 2018. 41(8): p. 1762-1775
    [PMID:29566255]