PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G160136_P02
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 251aa    MW: 27594.5 Da    PI: 9.7397
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G160136_P02genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.42.9e-22133195163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        e+elkre+rkq+NRe+ArrsR+RK+ae+eeL++ v++L aeN++L++e+ +l++ ++kl+ e+
  GRMZM2G160136_P02 133 ERELKREKRKQSNRESARRSRLRKQAETEELATQVESLAAENTSLRSEIGRLTESSEKLRLEN 195
                        89*********************************************************9887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.3E-18128192No hitNo description
SMARTSM003384.9E-22133197IPR004827Basic-leucine zipper domain
PfamPF001709.6E-21133195IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.185135198IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.63E-11136192No hitNo description
CDDcd147022.30E-19138186No hitNo description
PROSITE patternPS000360140155IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MGSFGLIATL HVATAMLWLD VELSILYLHV LQRDVYGPSK YTRLLQATKY TLREEGITVC  60
CILFLHDKCR HAPNHTLGNA TILPQHCFSA PVIKPSATNV ANSRAIGTTL SPPPGVMVPV  120
HNAVPSDLSV KDERELKREK RKQSNRESAR RSRLRKQAET EELATQVESL AAENTSLRSE  180
IGRLTESSEK LRLENSALMV KLKDTAEPSP SKAAASPSSP RASAENFLSM IDSANAPSVS  240
RHTEHVGPRL R
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149155RRSRLRK
2149156RRSRLRKQ
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G160136
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G160136_P02
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0336250.0BT033625.1 Zea mays full-length cDNA clone ZM_BFc0117G20 mRNA, complete cds.
GenBankBT0624120.0BT062412.1 Zea mays full-length cDNA clone ZM_BFb0293N02 mRNA, complete cds.
GenBankBT0627840.0BT062784.1 Zea mays full-length cDNA clone ZM_BFb0346H09 mRNA, complete cds.
GenBankJX4699570.0JX469957.1 Zea mays subsp. mays clone UT3219 bZIP-type transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001130428.11e-109G-box binding factor 1
RefseqXP_008648295.11e-109G-box binding factor 1 isoform X1
RefseqXP_008648296.11e-109G-box binding factor 1 isoform X1
RefseqXP_023156092.11e-109G-box binding factor 1 isoform X1
TrEMBLA0A1D6MR321e-124A0A1D6MR32_MAIZE; G-box-binding factor 3
TrEMBLA0A3L6FUX31e-124A0A3L6FUX3_MAIZE; Transcriptional activator TAF-1
STRINGGRMZM2G160136_P020.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Representative plantOGRP43461123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01120.14e-22G-box binding factor 2