PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G160136_P01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 170aa    MW: 18960 Da    PI: 9.7674
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G160136_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.54.3e-11133157125
                        XXXXCHHHCHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKk 25 
                        e+elkre+rkq+NRe+ArrsR+RK+
  GRMZM2G160136_P01 133 ERELKREKRKQSNRESARRSRLRKQ 157
                        89**********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.5E-8128157No hitNo description
PfamPF001707.2E-9133159IPR004827Basic-leucine zipper domain
CDDcd147021.14E-10138157No hitNo description
PROSITE patternPS000360140155IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MGSFGLIATL HVATAMLWLD VELSILYLHV LQRDVYGPSK YTRLLQATKY TLREEGITVC  60
CILFLHDKCR HAPNHTLGNA TILPQHCFSA PVIKPSATNV ANSRAIGTTL SPPPGVMVPV  120
HNAVPSDLSV KDERELKREK RKQSNRESAR RSRLRKQVCC VIQLYNEAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149155RRSRLRK
2149156RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.2631e-138endosperm| meristem| ovary| root| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G160136
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G160136_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0336251e-140BT033625.1 Zea mays full-length cDNA clone ZM_BFc0117G20 mRNA, complete cds.
GenBankBT0624121e-140BT062412.1 Zea mays full-length cDNA clone ZM_BFb0293N02 mRNA, complete cds.
GenBankBT0627841e-140BT062784.1 Zea mays full-length cDNA clone ZM_BFb0346H09 mRNA, complete cds.
GenBankJX4699571e-140JX469957.1 Zea mays subsp. mays clone UT3219 bZIP-type transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001130428.13e-53G-box binding factor 1
RefseqXP_008648295.13e-53G-box binding factor 1 isoform X1
RefseqXP_008648296.13e-53G-box binding factor 1 isoform X1
RefseqXP_023156092.13e-53G-box binding factor 1 isoform X1
TrEMBLA0A1D6MDA62e-65A0A1D6MDA6_MAIZE; G-box binding factor
STRINGGRMZM2G160136_P021e-114(Zea mays)