PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G133331_P01
Common NameLOC107403067, Zm.18774
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 432aa    MW: 46925.1 Da    PI: 7.4583
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G133331_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.44.8e-11147190346
                        XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                        + k++rr+++NReAAr+sR RKka+i eLe+   +L+   ++L+
  GRMZM2G133331_P01 147 DHKAQRRLAQNREAARKSRMRKKAYIVELENSRSKLSHLEQELQ 190
                        779****************************9999998887665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.3E-9142192No hitNo description
SMARTSM003382.8E-8145208IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.358147191IPR004827Basic-leucine zipper domain
PfamPF001705.9E-8148190IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.96E-8149192No hitNo description
PROSITE patternPS000360152167IPR004827Basic-leucine zipper domain
PfamPF141442.5E-28231306IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MHRQPSPHAF SSSGSWAEQG AGGYRHGRDG ATFLLPELLQ RSPNPSSKSS SAATFVPPLA  60
AAHGGGVAAP FGMAPLGVAA ADEARFCMTP WSAAAHFENW GDSGIVVTSP LAETASTDVD  120
MGGGGAMAQS VDGHDNSLPA CKVEPRDHKA QRRLAQNREA ARKSRMRKKA YIVELENSRS  180
KLSHLEQELQ RARQQGMFIA SGRSGDHGCS TGGALAFDLE YARWLDEHQH HMNDLRVALS  240
AQIGDDDLGV LVDGAMLHYD QMFRLKGVAT RTDVFHVLSG MWMSPAERFF MWLGGFRSSE  300
LLKVLARHVE PLTEQQLVGI CGLQQSLQQA EDALSQGMEA LQQALGDTLA AAATPCAADS  360
VTNYMGQMAV AMSKLATVEN FLRQADLLRQ QTLKQVRRIL TTRQAARALL VISDYFSRLR  420
ALSSLWLTRP TD
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G133331
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G133331_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0851450.0BT085145.1 Zea mays full-length cDNA clone ZM_BFb0304K15 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001308277.10.0uncharacterized protein LOC107403067
SwissprotQ5Z6N91e-171TGAL3_ORYSJ; Transcription factor TGAL3
TrEMBLA0A1D6LWH90.0A0A1D6LWH9_MAIZE; Transcription factor PERIANTHIA
STRINGGRMZM2G133331_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Representative plantOGRP7221667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-121bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]