PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G131961_P02
Common NameLOC100502433
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 402aa    MW: 44983.4 Da    PI: 7.3917
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G131961_P02genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1322.6e-10112140634
                        HHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeek 34 
                        + rr+++NReAAr+sR+RKka+i++Le+ 
  GRMZM2G131961_P02 112 VMRRLAQNREAARKSRLRKKAYIQQLETS 140
                        679***********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-5106167IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.829109153IPR004827Basic-leucine zipper domain
PfamPF001701.9E-7111144IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.3E-6112153No hitNo description
Gene3DG3DSA:1.20.5.1709.5E-7113154No hitNo description
PROSITE patternPS000360114129IPR004827Basic-leucine zipper domain
PfamPF141444.0E-28198274IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MMELYSGYLE DHFNLHKLSS ASPPQYMTPA ASPAQFAPAP LRMGYGRPAP VMGMWSSEPF  60
KVDSGGHATC SASTVMEADT KLETSRLQDV PQVALEPERS TDQETSRPPE RVMRRLAQNR  120
EAARKSRLRK KAYIQQLETS RMKLAQLELE LQRARRQQGA YANGSMGDPA LGYTGSIDPG  180
VAAFEIEYRH WVDEQKRHTA ELMSALQGQQ TSELELRLLV ETGLSNYEHL FRIKALAANA  240
DVFHVMSGVW KTPAERFFLW IGGFRPSEVL KILSPQLEPL AEAQRMLVGG LQHTSTQAED  300
ALSQGMEKLQ QNLAEILTAE ADPFGAPDAY MLQMATAVEK LKELVNFVTQ ADHLRLMTLQ  360
QMHKILTTRQ AARGLLALGD YFQRLRTLSS LWAARPREAA IS
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.974270.0aerial organ| ovary
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G131961
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00586DAPTransfer from AT5G65210Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G131961_P02
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0881450.0BT088145.1 Zea mays full-length cDNA clone ZM_BFc0036D12 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001183840.10.0uncharacterized LOC100502433
SwissprotA0A0P0WFC80.0TGAL6_ORYSJ; Transcription factor TGAL6
TrEMBLC4JBE80.0C4JBE8_MAIZE; Uncharacterized protein
STRINGGRMZM2G131961_P010.0(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-124bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Okada A, et al.
    OsTGAP1, a bZIP transcription factor, coordinately regulates the inductive production of diterpenoid phytoalexins in rice.
    J. Biol. Chem., 2009. 284(39): p. 26510-8
    [PMID:19635799]
  3. Okada K
    The biosynthesis of isoprenoids and the mechanisms regulating it in plants.
    Biosci. Biotechnol. Biochem., 2011. 75(7): p. 1219-25
    [PMID:21737944]
  4. Yamane H
    Biosynthesis of phytoalexins and regulatory mechanisms of it in rice.
    Biosci. Biotechnol. Biochem., 2013. 77(6): p. 1141-8
    [PMID:23748776]
  5. Miyamoto K, et al.
    Identification of target genes of the bZIP transcription factor OsTGAP1, whose overexpression causes elicitor-induced hyperaccumulation of diterpenoid phytoalexins in rice cells.
    PLoS ONE, 2014. 9(8): p. e105823
    [PMID:25157897]
  6. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]