PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G131961_P01
Common NameLOC100502433
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 405aa    MW: 45339.8 Da    PI: 7.8623
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G131961_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.81.3e-09115143634
                        HHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeek 34 
                        + rr+++NReAAr+sR+RKka+i++Le+ 
  GRMZM2G131961_P01 115 VMRRLAQNREAARKSRLRKKAYIQQLETS 143
                        679***********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.2E-4109170IPR004827Basic-leucine zipper domain
PfamPF001701.2E-6116147IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.97E-6116156No hitNo description
PROSITE patternPS000360117132IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.0E-7117157No hitNo description
PfamPF141444.0E-28201277IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006340anatomyadult vascular leaf
PO:0006354anatomyear floret
PO:0006505anatomycentral spike of ear inflorescence
PO:0009025anatomyvascular leaf
PO:0009074anatomystyle
PO:0009084anatomypericarp
PO:0009089anatomyendosperm
PO:0020040anatomyleaf base
PO:0020126anatomytassel inflorescence
PO:0020142anatomystem internode
PO:0025142anatomyleaf tip
PO:0001007developmental stagepollen development stage
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0001083developmental stageinflorescence development stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007003developmental stageIL.03 full inflorescence length reached stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
PO:0007016developmental stagewhole plant flowering stage
PO:0007031developmental stagemid whole plant fruit ripening stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007104developmental stageLP.15 fifteen leaves visible stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
PO:0007633developmental stageendosperm development stage
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MMELYSGYLE DHFNLHKLSS ASPPQYMTPA ASPAQFAPAP LRMGYGRPAP VMGMWSSEPF  60
KVDSGGHATC SASTVMEADT KLETSRLQDV PQVALEPERS TDQETSRPPE RVRTVMRRLA  120
QNREAARKSR LRKKAYIQQL ETSRMKLAQL ELELQRARRQ QGAYANGSMG DPALGYTGSI  180
DPGVAAFEIE YRHWVDEQKR HTAELMSALQ GQQTSELELR LLVETGLSNY EHLFRIKALA  240
ANADVFHVMS GVWKTPAERF FLWIGGFRPS EVLKILSPQL EPLAEAQRML VGGLQHTSTQ  300
AEDALSQGME KLQQNLAEIL TAEADPFGAP DAYMLQMATA VEKLKELVNF VTQADHLRLM  360
TLQQMHKILT TRQAARGLLA LGDYFQRLRT LSSLWAARPR EAAIS
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.974270.0aerial organ| ovary
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G131961
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00586DAPTransfer from AT5G65210Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G131961_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0881450.0BT088145.1 Zea mays full-length cDNA clone ZM_BFc0036D12 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008668574.10.0putative bZIP transcription factor superfamily protein isoform X1
SwissprotA0A0P0WFC80.0TGAL6_ORYSJ; Transcription factor TGAL6
TrEMBLC4JBE80.0C4JBE8_MAIZE; Uncharacterized protein
STRINGGRMZM2G131961_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35713877
Representative plantOGRP26791132
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-122bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Okada A, et al.
    OsTGAP1, a bZIP transcription factor, coordinately regulates the inductive production of diterpenoid phytoalexins in rice.
    J. Biol. Chem., 2009. 284(39): p. 26510-8
    [PMID:19635799]
  3. Okada K
    The biosynthesis of isoprenoids and the mechanisms regulating it in plants.
    Biosci. Biotechnol. Biochem., 2011. 75(7): p. 1219-25
    [PMID:21737944]
  4. Yamane H
    Biosynthesis of phytoalexins and regulatory mechanisms of it in rice.
    Biosci. Biotechnol. Biochem., 2013. 77(6): p. 1141-8
    [PMID:23748776]
  5. Miyamoto K, et al.
    Identification of target genes of the bZIP transcription factor OsTGAP1, whose overexpression causes elicitor-induced hyperaccumulation of diterpenoid phytoalexins in rice cells.
    PLoS ONE, 2014. 9(8): p. e105823
    [PMID:25157897]
  6. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]