PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G125243_P01
Common NameZEAMMB73_977538, Zm.128
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 469aa    MW: 51102.4 Da    PI: 6.8054
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G125243_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.61.5e-09184224545
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                        k  rr+++NReAAr+sR+RKka+i++Le    +L++  ++L
  GRMZM2G125243_P01 184 KTLRRLAQNREAARKSRLRKKAYIQNLESSRLKLTQLEQEL 224
                        7889************************9777777666555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.3E-8180243IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.312182226IPR004827Basic-leucine zipper domain
CDDcd147081.07E-22184236No hitNo description
PfamPF001701.0E-6184224IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.5E-7184227No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-7185228No hitNo description
PROSITE patternPS000360187202IPR004827Basic-leucine zipper domain
PfamPF141441.7E-31266341IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000037anatomyshoot apex
PO:0006310anatomytassel floret
PO:0006339anatomyjuvenile vascular leaf
PO:0006340anatomyadult vascular leaf
PO:0006341anatomyprimary shoot system
PO:0006354anatomyear floret
PO:0006505anatomycentral spike of ear inflorescence
PO:0008018anatomytransition vascular leaf
PO:0009001anatomyfruit
PO:0009009anatomyplant embryo
PO:0009025anatomyvascular leaf
PO:0009054anatomyinflorescence bract
PO:0009066anatomyanther
PO:0009074anatomystyle
PO:0009084anatomypericarp
PO:0009089anatomyendosperm
PO:0020040anatomyleaf base
PO:0020104anatomyleaf sheath
PO:0020126anatomytassel inflorescence
PO:0020127anatomyprimary root
PO:0020136anatomyear inflorescence
PO:0020142anatomystem internode
PO:0020148anatomyshoot apical meristem
PO:0025142anatomyleaf tip
PO:0025287anatomyseedling coleoptile
PO:0001007developmental stagepollen development stage
PO:0001009developmental stageD pollen mother cell meiosis stage
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0001083developmental stageinflorescence development stage
PO:0001094developmental stageplant embryo coleoptilar stage
PO:0001095developmental stageplant embryo true leaf formation stage
PO:0001180developmental stageplant proembryo stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007003developmental stageIL.03 full inflorescence length reached stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
PO:0007015developmental stageradicle emergence stage
PO:0007016developmental stagewhole plant flowering stage
PO:0007022developmental stageseed imbibition stage
PO:0007026developmental stageFL.00 first flower(s) open stage
PO:0007031developmental stagemid whole plant fruit ripening stage
PO:0007032developmental stagewhole plant fruit formation stage up to 10%
PO:0007045developmental stagecoleoptile emergence stage
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007065developmental stageLP.05 five leaves visible stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007094developmental stageLP.01 one leaf visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007104developmental stageLP.15 fifteen leaves visible stage
PO:0007106developmental stageLP.03 three leaves visible stage
PO:0007112developmental stage1 main shoot growth stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
PO:0007123developmental stageLP.06 six leaves visible stage
PO:0007633developmental stageendosperm development stage
PO:0021004developmental stageinflorescence initiation stage
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    Send to blast
MESRRGGSGA AAEDAGGAMP SFGPTQHAIR AGADVNSMQP SRVTDFGALA QSAGFRIEDL  60
ANLNANALFN LKPNSHTIDN SPLQFGNYGK SISPHINTTE ATTAATRIDP QLSAQQTGAQ  120
PILVALPTGN MENWGESAMA GSPMTDTSTD PDTDERNQMF EQGLVAVPTA SDSSDKSRDK  180
LDQKTLRRLA QNREAARKSR LRKKAYIQNL ESSRLKLTQL EQELQRARQQ GIFISTSGDQ  240
PQSTSGNGAL AFDMEYARWL EEHNKHVNEL RAAVNAHAGD NDLRCIVDSI MVHYDEIFKL  300
KGVAAKADVF HVLSGMWKTP AERCFMWLGG FRSSELLKLL AGHLEPLTDQ QLVGISNLQQ  360
SSQQAEDALS QGMEALQQSL AETLASGSLG PAGPSGNVAN YMGQMAMAMG KLGTLENFLR  420
QADNLRLQTL QQMQRILTTR QSARALLAIS DYFSRLRALS SLWLARPRE
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.1280.0meristem
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G125243
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G125243_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0660690.0BT066069.1 Zea mays full-length cDNA clone ZM_BFb0225O03 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001105448.20.0octopine synthase binding factor 3
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLC0PCQ00.0C0PCQ0_MAIZE; Octopine synthase binding factor4
STRINGGRMZM2G125243_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Representative plantOGRP7221667
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-139bZIP family protein
Publications ? help Back to Top
  1. Foley RC, et al.
    Isolation of a maize bZIP protein subfamily: candidates for the ocs-element transcription factor.
    Plant J., 1993. 3(5): p. 669-79
    [PMID:8374617]