PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G097081_P01
Common NameLOC103655729, ZEAMMB73_896721, Zm.133063
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 234aa    MW: 24662.2 Da    PI: 5.6644
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G097081_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.74e-151867255
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       ++kGVr +k +g+Wv+eIr p++   r r++lg+++ +++Aa+a +aa  +l+g
  GRMZM2G097081_P01 18 KFKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDAPDKAARAFDAAFVCLRG 67
                       89****999.**********933...5*********************999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.4E-251780IPR001471AP2/ERF domain
PROSITE profilePS5103221.1011878IPR001471AP2/ERF domain
SuperFamilySSF541715.89E-171880IPR016177DNA-binding domain
PfamPF008476.5E-81865IPR001471AP2/ERF domain
SMARTSM003801.3E-271884IPR001471AP2/ERF domain
CDDcd000184.41E-231880No hitNo description
PRINTSPR003677.5E-81930IPR001471AP2/ERF domain
PRINTSPR003677.5E-84157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MSSSPETEAA GSSSSSRKFK GVRKRKWGKW VSEIRLPNSR ERIWLGSYDA PDKAARAFDA  60
AFVCLRGRGA AGADLNFPDS PPPCRAGGCS SDPREVQAAA LSHANRAAVT AQQAAAALTM  120
DGGGADGSAP PWDYYYYYSV AHDAGGVLGG AAATSSTAEV VAPVRADGSI DWRPVMAHPP  180
PLFSPTGWGS NAYDFLQVPP PPAAVADEDM LDDGVHGATA SLWSFDSRDS YFRY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11925KGVRKRK
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G097081
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00151DAPTransfer from AT1G19210Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G097081_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008680656.11e-168dehydration-responsive element-binding protein 1G
TrEMBLA0A3L6EWC31e-167A0A3L6EWC3_MAIZE; Ethylene-responsive transcription factor ERF017
TrEMBLK7U5H51e-167K7U5H5_MAIZE; Putative AP2/EREBP transcription factor superfamily protein
STRINGGRMZM2G097081_P011e-167(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86132144
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.18e-24ERF family protein