PlantTFDB
Plant Transcription Factor Database
PlantRegMap/PlantTFDB v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G095078_P01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 386aa    MW: 40283.4 Da    PI: 6.7432
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G095078_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_175.66.4e-24257319163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        e+e+krerrkq+NRe+ArrsR+RK++e+eeL++kv+ L++eN+aL+ el++lkk ++ +++e+
  GRMZM2G095078_P01 257 EREIKRERRKQSNRESARRSRLRKQQECEELARKVADLTTENSALRAELDNLKKACQDMEAEN 319
                        89*********************************************************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165969.4E-8125234No hitNo description
Gene3DG3DSA:1.20.5.1705.4E-17254316No hitNo description
SMARTSM003382.0E-22257321IPR004827Basic-leucine zipper domain
PfamPF001702.6E-21257319IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.139259322IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.63E-11260315No hitNo description
CDDcd147024.64E-22262313No hitNo description
PROSITE patternPS000360264279IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006341anatomyprimary shoot system
PO:0009001anatomyfruit
PO:0025287anatomyseedling coleoptile
PO:0007022developmental stageseed imbibition stage
PO:0007045developmental stagecoleoptile emergence stage
PO:0007094developmental stageLP.01 one leaf visible stage
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MASSSDEQSK PPEPPAAAAV VTAAAPPQTH AEWVASLQAY YAAAGHPYAW PAQHLMAAAA  60
AGAHFGTPVP FPVYHPGAAA AYYAHASMAA GVPYPTCEAV PAVALPTVPE GKGKGKGGGA  120
SPEKGSSGAP SGEDASRSDD SGSDESSETR DDDTDHKDSS APKKRKSGNT SAEGEPSQAT  180
VVRYAAVESP YPAKGRSASK LPVSAPGRAA LPSATPNLNI GMDIWNASPA LAVPAVQGEV  240
SPGLALARRD GVTQLDEREI KRERRKQSNR ESARRSRLRK QQECEELARK VADLTTENSA  300
LRAELDNLKK ACQDMEAENS RLLGGVADAQ VPSVTTTLGM SIEPPKLQLQ LQQHHDEEGQ  360
LHKKSSNNSN GNCAGGSHKP EANTTR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1273279RRSRLRK
2273280RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.759100.0ear| embryo| meristem| ovary| pericarp| pollen| tassel
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G095078
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G095078_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX4699230.0JX469923.1 Zea mays subsp. mays clone UT3179 bZIP-type transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001105491.10.0maize Em binding protein-1a
SwissprotP250321e-64EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLB4FC610.0B4FC61_MAIZE; EM binding protein 1-like protein
TrEMBLK4JE660.0K4JE66_MAIZE; BZIP-type transcription factor (Fragment)
STRINGGRMZM2G095078_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Representative plantOGRP1275345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.12e-31basic region/leucine zipper transcription factor 16