PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G080731_P04
Common NameLOC100274148, ZEAMMB73_652258
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 345aa    MW: 38043 Da    PI: 7.6683
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G080731_P04genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.53.8e-104989545
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                       k+ rr+++NReAAr+sR+RKka++e+Le+   +L++  ++L
  GRMZM2G080731_P04 49 KALRRLAQNREAARKSRLRKKAYVEQLENSRLKLSQLEQEL 89
                       788*************************9877777766655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-443143IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.0364791IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.6E-74994No hitNo description
PfamPF001702.8E-74989IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-74992No hitNo description
PROSITE patternPS0003605267IPR004827Basic-leucine zipper domain
PfamPF141442.4E-32133209IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MAYASPGTDD TSTDLDTDEK NHMLELGQLV SLTASDSGNK AKDKLLGQKA LRRLAQNREA  60
ARKSRLRKKA YVEQLENSRL KLSQLEQELQ RARQQGIFIP TPGDDQQPNS TSEKGALAFD  120
KDYAGWEDEH RKQISELRAA LSAHAGDDEL RRIVDGVMAH HHEAFRLKCV AARADAFHVL  180
SGMWKTPVER CFMWLGGFRP SEILKFLASH LDPLTERQLA SVHGLQQSSQ QAEEGISQRV  240
QALQQSVAET LASSGSPCLP VPAGRAPPPG DDAAPDCSGT MAAAVAKLVA LESLVHEADG  300
LRRQTLEQMQ RVLTTRQSAR ALLVISDYLS RLRALSSLWI ARPRE
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.74720.0silk
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G080731
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Function -- GeneRIF ? help Back to Top
  1. Expressed solely in silk tissue.
    [PMID: 29534529]
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G080731_P04
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0373740.0BT037374.1 Zea mays full-length cDNA clone ZM_BFb0166L17 mRNA, complete cds.
GenBankBT0424500.0BT042450.1 Zea mays full-length cDNA clone ZM_BFb0274O23 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001141998.10.0uncharacterized protein LOC100274148
RefseqXP_008654626.10.0putative bZIP transcription factor superfamily protein isoform X2
SwissprotQ415581e-146HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLB4FJT60.0B4FJT6_MAIZE; Transcription factor TGA6
TrEMBLK4JRQ70.0K4JRQ7_MAIZE; BZIP-type transcription factor (Fragment)
STRINGGRMZM2G080731_P030.0(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-122bZIP family protein
Publications ? help Back to Top
  1. Li W,Yu D,Yu J,Zhu D,Zhao Q
    Functional Analysis of Maize Silk-Specific ZmbZIP25 Promoter.
    Int J Mol Sci, 2018.
    [PMID:29534529]