PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G080168_P01
Common NamebHLH141, IDP1499, ZEAMMB73_435335, Zm.18099
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bHLH
Protein Properties Length: 469aa    MW: 48787.1 Da    PI: 7.5643
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G080168_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH277.8e-09266313455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  GRMZM2G080168_P01 266 SHSLAERVRREKIGERMKLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 313
                        8*************************9....556*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.42E-10260317No hitNo description
SuperFamilySSF474591.31E-16260329IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.516262312IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-16262330IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.5E-6266313IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-10268318IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006340anatomyadult vascular leaf
PO:0006505anatomycentral spike of ear inflorescence
PO:0009009anatomyplant embryo
PO:0009025anatomyvascular leaf
PO:0009054anatomyinflorescence bract
PO:0009089anatomyendosperm
PO:0020040anatomyleaf base
PO:0020126anatomytassel inflorescence
PO:0020127anatomyprimary root
PO:0020136anatomyear inflorescence
PO:0020142anatomystem internode
PO:0001007developmental stagepollen development stage
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0001083developmental stageinflorescence development stage
PO:0001095developmental stageplant embryo true leaf formation stage
PO:0007003developmental stageIL.03 full inflorescence length reached stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
PO:0007026developmental stageFL.00 first flower(s) open stage
PO:0007031developmental stagemid whole plant fruit ripening stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007104developmental stageLP.15 fifteen leaves visible stage
PO:0007112developmental stage1 main shoot growth stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
PO:0007633developmental stageendosperm development stage
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    Send to blast
MAHDGFLGGF HELSWPLVHA AAAGAAPFDP LLVHVPHALM GAGAGWQHEA AVGAIVPSQS  60
QSQSPPPPPS SLAAAAVGGA DAVEAAMMEQ LASRLGVSVP SPPSSRYVSC HSTPVAPCVL  120
AGDAERAERL SCFPASGRKL SRVASSQSLL REQAPAPAPA PSPGAAAKQH AGDGACDGPC  180
RKRKASGTSS KQSKAKEAVT TAPPESRETA ETRAKKCKLS TDEERKPAAG EGWRGSGKGK  240
ELVAADAEPP KDYIHVRARR GQATDSHSLA ERVRREKIGE RMKLLQDLVP GCSKVTGKAV  300
MLDEIINYVQ SLQRQVEFLS MKLSTVNPRL ELGADDSFVP RDDANKMCAA ATSSISMAQQ  360
PLPLPAAYHA LEGSSPAFCY TTTPPAPGTA ARLGVAASDA KAFEMAPPSS AATVNHAGTA  420
ERRPLEGPAD ENASPQMGGR SLWEEGDDDL QSLVLMGFRG RHVIIGGPI
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G080168
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G080168_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0370220.0BT037022.1 Zea mays full-length cDNA clone ZM_BFb0151M19 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001136483.10.0uncharacterized protein LOC100216597
TrEMBLB4FIT40.0B4FIT4_MAIZE; BHLH transcription factor
STRINGGRMZM2G080168_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5816313
MonocotsOGMP133132532
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23690.12e-50bHLH family protein