PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G074373_P01
Common NameLOC100192709
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 382aa    MW: 40625.6 Da    PI: 8.5877
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G074373_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.84.3e-22285347163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        e+elkr++rkq+NRe+ArrsR+RK+ae+eeL++++++L++eN +L++e+++++ke+++l s++
  GRMZM2G074373_P01 285 ERELKRQKRKQSNRESARRSRLRKQAECEELAQRADVLKQENASLRDEVNRIRKEYEELLSKN 347
                        89**********************************************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077776.1E-29195IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165963.6E-34135258No hitNo description
Gene3DG3DSA:1.20.5.1704.9E-17279344No hitNo description
PfamPF001701.4E-20285347IPR004827Basic-leucine zipper domain
SMARTSM003387.4E-21285349IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.208287350IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-11288344No hitNo description
CDDcd147024.00E-25290340No hitNo description
PROSITE patternPS000360292307IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MGSSGADTSS KPNKASAPQE QQQPATSGAA TPAVYPDWSS FQAYPPIPPH GFFPSPVASS  60
PQGHPYMWGA QPMIPPYGAP PYVMYPPGVY AHPSMASGAH PFTPYAITSP NGNADATGTT  120
AVACDTDGKP SEGKDKSPTK RPKGTLGSLN MLTGKNPSEH GKTSGASANG ATSQSGESGS  180
DSSSEGSEGN SHNDSYKHSG QEQDGDVRSS QNGASRSPSE GKFNQAMAIM PMPSSGPVTG  240
PTTNLNIGMD YWANTASSAP VIHGKVTPTT VPGAVVPAEQ WIQDERELKR QKRKQSNRES  300
ARRSRLRKQA ECEELAQRAD VLKQENASLR DEVNRIRKEY EELLSKNNSL KEKLEGKQHK  360
TDEAGLNNKL QHSGNDIQKK GN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1301307RRSRLRK
2301308RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.18140.0endosperm| glume| meristem| ovary| pollen| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G074373
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Highly expressed in roots and at lower levels in stems and leaves. {ECO:0000269|Ref.2}.
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.2}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G074373_P01
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.2). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.2). {ECO:0000269|Ref.2}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0347690.0BT034769.2 Zea mays full-length cDNA clone ZM_BFb0017D08 mRNA, complete cds.
GenBankBT0606890.0BT060689.1 Zea mays full-length cDNA clone ZM_BFb0034I13 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001131383.10.0uncharacterized protein LOC100192709
RefseqXP_008672076.10.0putative bZIP transcription factor superfamily protein isoform X1
RefseqXP_008672077.10.0putative bZIP transcription factor superfamily protein isoform X1
SwissprotA0A3B6MPP50.0BZP1D_WHEAT; bZIP transcription factor 1-D
TrEMBLB4FCD10.0B4FCD1_MAIZE; BZIP transcription factor 16
STRINGGRMZM2G074373_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Representative plantOGRP7001767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32150.15e-94basic region/leucine zipper transcription factor 68
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]