PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G073427_P03
Common NamebZIP111, gpm349
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 184aa    MW: 20189.9 Da    PI: 10.1324
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G073427_P03genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.61.7e-15252858
                       HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58
                       rr+ +NRe+ArrsR+RK+a +  Le  v  L++eN +L k+l  ++++++ 
  GRMZM2G073427_P03  2 RRMVSNRESARRSRKRKQAHLTDLESQVSRLTSENASLLKRLADMTQKYKD 52
                       8**********************************9999666666665554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147028.99E-17150No hitNo description
PROSITE profilePS5021710.909149IPR004827Basic-leucine zipper domain
SMARTSM003383.6E-11259IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.5E-13251No hitNo description
SuperFamilySSF579597.74E-12250No hitNo description
PfamPF001701.5E-12251IPR004827Basic-leucine zipper domain
PROSITE patternPS000360217IPR004827Basic-leucine zipper domain
PfamPF124981.9E-2366165IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MRRMVSNRES ARRSRKRKQA HLTDLESQVS RLTSENASLL KRLADMTQKY KDASVDNKNL  60
TVDVETMRRK VNIAEEAVRR LTGITLMLPT AFEKPTSSAP LSSCPSDAAS ASASAAIEDS  120
VKHFLQAPLE NSGIIPNAAV FQTKPASLHR VASLENLQKR IVGDAMYSET ASTTFSDPEA  180
LADR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11117RRSRKRK
21118RRSRKRKQ
31318SRKRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.93860.0leaf| meristem| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G073427
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed in developing seeds from 5 to 30 days after flowering (DAF). {ECO:0000269|PubMed:11133985}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the DNA specific sequence 5'-GCCACGT[AC]AG-3' found in the alpha-globulin gene promoter (PubMed:9049271, PubMed:11572990). Does not bind to promoters of other major storage genes such as glutelin, prolamin and albumin (PubMed:9049271). Binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters (PubMed:11133985). {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:11572990, ECO:0000269|PubMed:9049271}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G073427_P03
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0421030.0BT042103.1 Zea mays full-length cDNA clone ZM_BFb0133G19 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001142918.11e-130Basic leucine zipper 25
SwissprotQ7X9A81e-30RSBZ2_ORYSJ; bZIP transcription factor RISBZ2
TrEMBLB4FYB51e-129B4FYB5_MAIZE; BZIP transcription factor
STRINGGRMZM2G073427_P021e-130(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.21e-22bZIP family protein
Publications ? help Back to Top
  1. Onodera Y,Suzuki A,Wu CY,Washida H,Takaiwa F
    A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif.
    J. Biol. Chem., 2001. 276(17): p. 14139-52
    [PMID:11133985]
  2. Yang D,Wu L,Hwang YS,Chen L,Huang N
    Expression of the REB transcriptional activator in rice grains improves the yield of recombinant proteins whose genes are controlled by a Reb-responsive promoter.
    Proc. Natl. Acad. Sci. U.S.A., 2001. 98(20): p. 11438-43
    [PMID:11572990]
  3. Cheng S,Wang Z,Hong M
    Rice bZIP protein, REB, interacts with GCN4 motif in promoter of Waxy gene.
    Sci. China, C, Life Sci., 2002. 45(4): p. 352-60
    [PMID:18759022]
  4. Alexandrov NN, et al.
    Insights into corn genes derived from large-scale cDNA sequencing.
    Plant Mol. Biol., 2009. 69(1-2): p. 179-94
    [PMID:18937034]