PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G060216_P02
Common Namelg2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 500aa    MW: 54534.4 Da    PI: 7.0195
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G060216_P02genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1353.2e-11190219433
                        XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 
                         k err+++NReAAr+sR+RKka++++Le+
  GRMZM2G060216_P02 190 AKTERRLAQNREAARKSRLRKKAYVQQLET 219
                        799*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.2E-8187263IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.243189233IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.2E-8189233No hitNo description
PfamPF001704.5E-8190220IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.03E-7191234No hitNo description
PROSITE patternPS000360194209IPR004827Basic-leucine zipper domain
PfamPF141441.9E-29272346IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
MVSVRYCLGR DFQPAAASAA YFGFGELEEA LIHGGGAASA GGGVDPGVII KNDVAQAKSA  60
AGYLAGAGTG RPPTLEIFPS WPMRHQQQLH SGNSQSVGST GTDSSSAQNT MSQMELVSPA  120
SSAPRQEVMM VTTDDYSYKP GLAAAPAAAA PPSFQQHHPL PLQLHGGEGG GDHDKRKHGS  180
TRKDGKLVDA KTERRLAQNR EAARKSRLRK KAYVQQLETS RIRLQQVEHE LQRARSQGLF  240
VGGCSAAGDM SSGAAMFDME YARWLDDDTK RLAELRGGLQ AHLLDGNLGL IVEECMQHYD  300
ELFQLKAALA RSDVFHLLTG SWATPAERCF FWMGGFRPSE LLKILIPQLD PLTEQQLLGI  360
CNLQQSSEQA EEALAQGLHQ LHQSLADTVA AGTLNDGAAA PNYMNIMAVA LEKLASLENF  420
YQQADNLRHQ TLHQMRRILT TRQAARCFLS IGEYYSRLRA LSNLWASRPR DNFIGTESLS  480
PTATELQALH HQQQNQFAGF
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.168550.0ear| meristem
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G060216
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expression in meristem/developing ligule regions. {ECO:0000269|PubMed:9490265}.
Functional Description ? help Back to Top
Source Description
UniProtRequired for the formation of the blade-sheath boundary in leaves. Promotes flowering. {ECO:0000269|PubMed:9490265}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G060216_P02
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF0369490.0AF036949.1 Zea mays basic leucine zipper protein (liguleless2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008673407.10.0transcription factor LG2 isoform X1
SwissprotO490670.0LG2_MAIZE; Transcription factor LG2
TrEMBLA0A1D6N6N30.0A0A1D6N6N3_MAIZE; Basic leucine zipper protein
STRINGGRMZM2G060216_P010.0(Zea mays)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-137bZIP family protein
Publications ? help Back to Top
  1. Walsh J,Freeling M
    The liguleless2 gene of maize functions during the transition from the vegetative to the reproductive shoot apex.
    Plant J., 1999. 19(4): p. 489-95
    [PMID:10504571]
  2. Schnable PS, et al.
    The B73 maize genome: complexity, diversity, and dynamics.
    Science, 2009. 326(5956): p. 1112-5
    [PMID:19965430]