PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G037910_P01
Common NamebZIP46, LOC100502386
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 479aa    MW: 51646.7 Da    PI: 9.8806
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G037910_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.81.5e-10336391560
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                        +r +r   NR++A +s +RK +++ eLe+kv +L+ e ++L +++ + + e+++l+
  GRMZM2G037910_P01 336 RRVKRILANRISAAKSKERKVKYMGELERKVRVLQMETSTLSSKAASSQRECEALR 391
                        57799999*********************************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.2E-12332396IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.071334397IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.73E-10336391No hitNo description
PfamPF001703.9E-9336391IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.6E-10336391No hitNo description
CDDcd147032.17E-18337388No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000037anatomyshoot apex
PO:0006339anatomyjuvenile vascular leaf
PO:0006340anatomyadult vascular leaf
PO:0006354anatomyear floret
PO:0006505anatomycentral spike of ear inflorescence
PO:0008018anatomytransition vascular leaf
PO:0009001anatomyfruit
PO:0009009anatomyplant embryo
PO:0009025anatomyvascular leaf
PO:0009054anatomyinflorescence bract
PO:0009074anatomystyle
PO:0009084anatomypericarp
PO:0009089anatomyendosperm
PO:0020040anatomyleaf base
PO:0020104anatomyleaf sheath
PO:0020126anatomytassel inflorescence
PO:0020127anatomyprimary root
PO:0020136anatomyear inflorescence
PO:0020142anatomystem internode
PO:0020148anatomyshoot apical meristem
PO:0025287anatomyseedling coleoptile
PO:0001007developmental stagepollen development stage
PO:0001009developmental stageD pollen mother cell meiosis stage
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0001083developmental stageinflorescence development stage
PO:0001094developmental stageplant embryo coleoptilar stage
PO:0001095developmental stageplant embryo true leaf formation stage
PO:0001180developmental stageplant proembryo stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
PO:0007015developmental stageradicle emergence stage
PO:0007016developmental stagewhole plant flowering stage
PO:0007022developmental stageseed imbibition stage
PO:0007026developmental stageFL.00 first flower(s) open stage
PO:0007031developmental stagemid whole plant fruit ripening stage
PO:0007032developmental stagewhole plant fruit formation stage up to 10%
PO:0007045developmental stagecoleoptile emergence stage
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007065developmental stageLP.05 five leaves visible stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007104developmental stageLP.15 fifteen leaves visible stage
PO:0007106developmental stageLP.03 three leaves visible stage
PO:0007112developmental stage1 main shoot growth stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
PO:0007123developmental stageLP.06 six leaves visible stage
PO:0007633developmental stageendosperm development stage
PO:0021004developmental stageinflorescence initiation stage
Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    Send to blast
MDEDWSTDPA HRRRRLLLPT SCQTQTQNPP QTQPPLPMDL ASQYNRRFAP SLFLPPMAPR  60
LASSSGFSVF SNYQSPPTLV PTAAGAGSHL ARSLPKLPLF SMDSLGLLPY STNPAAGAAV  120
PRSLSSPGGS EQQVPSASGL PPRGAGHRRS RSDFLVGFSR PNQLSLPMTP AAGEYRSREA  180
SVLEELFRSY RDPNLSSSGD NNSERNDHLG RQLTGQGAWS PGDSSDNDAE SWAASGSAAA  240
GTSASHSHTR HCRSLSVDSI MGNLNFGGLG QVSLRLPPPS PVAGAGGSLS RAGSGASGGA  300
VATASSQPAN GEFSESEMKK IMANDRLAEL ALVDPRRVKR ILANRISAAK SKERKVKYMG  360
ELERKVRVLQ METSTLSSKA ASSQRECEAL RILNNEMKIR LQAMEQQAQL KDALNEALTA  420
EVQRLKQIAG EASDPHVPNM SRKIVEQQLQ KQPSEAQLAE QQQPQESEEF KAQQKQWNH
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G037910
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G037910_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0879700.0BT087970.1 Zea mays full-length cDNA clone ZM_BFb0335O20 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001183793.10.0uncharacterized protein LOC100502386
TrEMBLA0A3L6G0M00.0A0A3L6G0M0_MAIZE; Transcription factor VIP1
TrEMBLC4JAX30.0C4JAX3_MAIZE; BZIP transcription factor
STRINGGRMZM2G037910_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP148701820
Representative plantOGRP12617181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.32e-45bZIP family protein