PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G030877_P01
Common NameLOC100383078, ZEAMMB73_629142
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 486aa    MW: 52929.3 Da    PI: 6.9323
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G030877_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.93.3e-11183211533
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                        k+ rr+++NReAAr+sR+RKka+i++Le 
  GRMZM2G030877_P01 183 KVIRRLAQNREAARKSRLRKKAYIQQLES 211
                        789************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.2E-7179269IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.668181225IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.8E-8181225No hitNo description
PfamPF001702.0E-8183217IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.75E-7183211No hitNo description
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
PfamPF141448.0E-29263336IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000037anatomyshoot apex
PO:0006310anatomytassel floret
PO:0006339anatomyjuvenile vascular leaf
PO:0006340anatomyadult vascular leaf
PO:0006341anatomyprimary shoot system
PO:0006354anatomyear floret
PO:0006505anatomycentral spike of ear inflorescence
PO:0008018anatomytransition vascular leaf
PO:0009001anatomyfruit
PO:0009009anatomyplant embryo
PO:0009025anatomyvascular leaf
PO:0009054anatomyinflorescence bract
PO:0009066anatomyanther
PO:0009074anatomystyle
PO:0009084anatomypericarp
PO:0009089anatomyendosperm
PO:0020040anatomyleaf base
PO:0020104anatomyleaf sheath
PO:0020126anatomytassel inflorescence
PO:0020127anatomyprimary root
PO:0020136anatomyear inflorescence
PO:0020142anatomystem internode
PO:0020148anatomyshoot apical meristem
PO:0025142anatomyleaf tip
PO:0025287anatomyseedling coleoptile
PO:0001007developmental stagepollen development stage
PO:0001009developmental stageD pollen mother cell meiosis stage
PO:0001052developmental stagevascular leaf expansion stage
PO:0001053developmental stagevascular leaf post-expansion stage
PO:0001083developmental stageinflorescence development stage
PO:0001094developmental stageplant embryo coleoptilar stage
PO:0001095developmental stageplant embryo true leaf formation stage
PO:0001180developmental stageplant proembryo stage
PO:0007001developmental stageearly whole plant fruit ripening stage
PO:0007003developmental stageIL.03 full inflorescence length reached stage
PO:0007006developmental stageIL.00 inflorescence just visible stage
PO:0007015developmental stageradicle emergence stage
PO:0007016developmental stagewhole plant flowering stage
PO:0007022developmental stageseed imbibition stage
PO:0007026developmental stageFL.00 first flower(s) open stage
PO:0007031developmental stagemid whole plant fruit ripening stage
PO:0007032developmental stagewhole plant fruit formation stage up to 10%
PO:0007045developmental stagecoleoptile emergence stage
PO:0007063developmental stageLP.07 seven leaves visible stage
PO:0007065developmental stageLP.05 five leaves visible stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007094developmental stageLP.01 one leaf visible stage
PO:0007101developmental stageLP.09 nine leaves visible stage
PO:0007104developmental stageLP.15 fifteen leaves visible stage
PO:0007106developmental stageLP.03 three leaves visible stage
PO:0007112developmental stage1 main shoot growth stage
PO:0007116developmental stageLP.11 eleven leaves visible stage
PO:0007123developmental stageLP.06 six leaves visible stage
PO:0007633developmental stageendosperm development stage
PO:0021004developmental stageinflorescence initiation stage
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    Send to blast
MGDTSSSSHS RQDPSLLGYG FHGAIANSTP PANFFDQGGG GTYFGELEEA FMHQVASLRR  60
TQQAATVSAP HHGDTKPFPT AAGATAATAT ATARPPPTLD IFPAWPMRSR LHTPKECSNV  120
TADSTDDSES SSKNHSNHSS DQLGAAAAAN MASQFEQASQ QQLQHKNMAT SSTPRTGKAL  180
DPKVIRRLAQ NREAARKSRL RKKAYIQQLE SCKLKLSQME QDMQRARTQG LFLGGDPGAS  240
TSSGAAMFDV EYARWLDNHS RRLAELNGAL HAHLADGDLR AIVDDALTHH DELFQLKAMA  300
AKSDVFHLIT GVWTTPAERC FLWMGGFRPS DLLKTLLPQL DPLTEQQVVG ICSLQQSSQQ  360
AEEALSQGLE QLHQSLADTM AGGSLTDDAN MSFMSQMALA LGKLANLEGF VIQADNLRQQ  420
TLHQMHRILT VRQAARCLLA IGEYHNRLRA LSSLWASRPR EILVTDEGNC EISIAAQPSQ  480
NQFSTF
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.214920.0root
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G030877
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G030877_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0661290.0BT066129.1 Zea mays full-length cDNA clone ZM_BFc0005P07 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001169220.10.0uncharacterized LOC100383078
RefseqXP_008677589.10.0putative bZIP transcription factor superfamily protein isoform X1
SwissprotQ53Q700.0TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBLC0PCW00.0C0PCW0_MAIZE; BZIP transcription factor family protein
STRINGGRMZM2G030877_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44443670
Representative plantOGRP64961119
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-133bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]
  3. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]