PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G029979_P01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 475aa    MW: 51260.3 Da    PI: 8.7832
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G029979_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1353.1e-11171201333
                        XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 
                        + k  rr+++NReAAr+sR+RKka+i++Le+
  GRMZM2G029979_P01 171 DAKTLRRLAQNREAARKSRLRKKAYIQNLET 201
                        67999************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.4E-9163221No hitNo description
SMARTSM003381.4E-5169251IPR004827Basic-leucine zipper domain
PfamPF001701.9E-8172201IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.69E-7173210No hitNo description
PROSITE patternPS000360176191IPR004827Basic-leucine zipper domain
PfamPF141443.0E-27238322IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
MGDRTWQQPH AQASSPDAGT KVQASSSSVH GNIIRKEPAG GGGYDDMAEF DQALFLYLNS  60
SQDQASVIQD QPQTLNIFPS EPMHVVEPAA PKESMGATTN NTAWNNAGAG PSKQPPSNLP  120
SRTTATPAGP RKDGSKPPAA VKREGSSSGG AMGSGTPSTS NQQEGPTRTS DAKTLRRLAQ  180
NREAARKSRL RKKAYIQNLE TSRVRLAHLE QEVHRSRTQA AWFDMEHARW QEEHGKVMRH  240
LRAALEAEYA ATATTPAAAA ADAQLRQLVD AAAAHHGALA ELKAVAASAD AFHLVSGAWV  300
SAAERCFLWI GGFRPSELIK IAARHAEPLT EQQAMSVCGV QQWARDAEAA LDHELQAMHS  360
SVSEAISSDA AALLYPYSDV PGFMATMSLA ISKLASLEAF VRQADALRLQ TLHRLPQILT  420
ARQSARCFLA IADYSHRLRA LSELWHTRQG HERAASTQAA RPSQTPPYQS RDGLL
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.1038500.0meristem| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G029979
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G029979_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9513161e-121EU951316.1 Zea mays clone 695528 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008645440.10.0transcription factor TGAL9 isoform X3
TrEMBLA0A3L6ESM00.0A0A3L6ESM0_MAIZE; BZIP transcription factor TGA10
STRINGGRMZM2G029979_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Representative plantOGRP1445244
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-85bZIP family protein