PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G021276_P03
Common NameZEAMMB73_833689
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bHLH
Protein Properties Length: 214aa    MW: 23306.5 Da    PI: 7.0089
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G021276_P03genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.10.00075173195729
                        HHHHHHHHHHHHHHHHHHCTSCC CS
                HLH   7 erErrRRdriNsafeeLrellPk 29 
                        + E++RR r+ +++  L  l+P+
  GRMZM2G021276_P03 173 KKEKQRRLRLTEKYTALMHLIPN 195
                        57********************8 PP

Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0006310anatomytassel floret
PO:0009066anatomyanther
PO:0020126anatomytassel inflorescence
PO:0001007developmental stagepollen development stage
PO:0001009developmental stageD pollen mother cell meiosis stage
PO:0007072developmental stageLP.18 eighteen leaves visible stage
PO:0007104developmental stageLP.15 fifteen leaves visible stage
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MYHPQCELLT MAHETPDLDA GQPHLTVSGV ASIPAELSFH LLHSLDAAAA VNPVTAPPQS  60
TIDYFLGGAD PHQQAMQYEP LPPAAGGHHQ YTMDMFRDYC DGHYPTAEPY IRGTMTGALV  120
FGATDDDDSA AAYMPGGHFE TSPPPPRATG RGRKRGRALG GGFHAVLANG VEKKEKQRRL  180
RLTEKYTALM HLIPNVTKVV PNPPLMFVHR FKLS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1151157GRKRGRA
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G021276
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G021276_P03
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0433930.0BT043393.1 Zea mays full-length cDNA clone ZM_BFc0176H05 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001149921.11e-145uncharacterized protein LOC100283549
RefseqXP_008655013.11e-145PREDICTED: LOC100283549 isoform X1
RefseqXP_008655014.11e-145PREDICTED: LOC100283549 isoform X1
RefseqXP_008655015.11e-145PREDICTED: LOC100283549 isoform X1
RefseqXP_008655016.11e-145PREDICTED: LOC100283549 isoform X1
RefseqXP_008655017.11e-145PREDICTED: LOC100283549 isoform X1
SwissprotQ5JNS02e-48TIP2_ORYSJ; Transcription factor TIP2
TrEMBLB4G2051e-158B4G205_MAIZE; Putative HLH DNA-binding domain superfamily protein isoform 1
STRINGGRMZM2G021276_P021e-145(Zea mays)