PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G017145_P05
Common NameZm.86044
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bHLH
Protein Properties Length: 70aa    MW: 7822.99 Da    PI: 10.9481
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G017145_P05genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.61.5e-053763127
                       CHHHHHHHHHHHHHHHHHHHHHHHCTS CS
                HLH  1 rrrahnerErrRRdriNsafeeLrell 27
                       +++ ++erE+r Rd+ N+ f eL  +l
  GRMZM2G017145_P05 37 KKVHKSEREKRKRDKQNDLFGELGNML 63
                       67889******************9887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.45E-52965IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    Send to blast
MVPRDRAHSA AAATAPPTEK PVQGPIQNNK CEKKAPKKVH KSEREKRKRD KQNDLFGELG  60
NMLGMRSVTN
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.860442e-62embryo| endosperm| meristem| ovary| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G017145
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G017145_P05
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9622511e-102EU962251.1 Zea mays clone 241273 amelogenin precursor like protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001149147.13e-38amelogenin precursor like protein
TrEMBLA0A096Q0S21e-45A0A096Q0S2_MAIZE; Uncharacterized protein
STRINGGRMZM2G017145_P029e-38(Zea mays)