PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G016150_P01
Common NamebZIP128
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 405aa    MW: 42352.9 Da    PI: 4.9427
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G016150_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1422.1e-13214265556
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                        + +rrkq+NRe+ArrsR RK a + eLe  v++L  eN++L  +l   +++ 
  GRMZM2G016150_P01 214 RLQRRKQSNRESARRSRSRKAAHLNELEAQVAQLRVENSSLLRRLADVNQKF 265
                        679**************************************98887777665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-15210274IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.254212267IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-9213266No hitNo description
PfamPF001703.6E-10214263IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.81E-9214263No hitNo description
CDDcd147024.22E-6216266No hitNo description
PfamPF124988.6E-50281398IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MERVFSVEEI PNPYWVPPHP QSAAAGAVAA PAGEAAGLMN RCPSEWYFQK FLEEAVLDSP  60
VPVAGVSRGS VGAGVEAAER KTPGTAAAAA ASSSVVDPVE YNAMLKQKLE KDLAAVALWR  120
ASGAAPPDNS PAGSSLPSVD VPHAGPLKPM GGTGSLVQNK LAGAPGGGSS PHVVQNADIP  180
VKQTTSSSSR EQSDDDDMEG DAETTGNGNP VQQRLQRRKQ SNRESARRSR SRKAAHLNEL  240
EAQVAQLRVE NSSLLRRLAD VNQKFNEAAV DNRVLKADVE TLRAKVKMAE DSVKRVTGMN  300
TLFPAVSDMS SLSMPFNGSP SDSASDAAVP IQDDLNSYFA NPSEIGGSNG YMPDIASSAQ  360
EDDDFVNGAQ VAGKMGSTDS LQRVASLEHL QKRMCGGPAS SGSTS
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.160.0ear| meristem| ovary| shoot
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G016150
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed in developing seeds from 5 to 30 days after flowering (DAF). {ECO:0000269|PubMed:11133985}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the DNA specific sequence 5'-GCCACGT[AC]AG-3' found in the alpha-globulin gene promoter (PubMed:9049271, PubMed:11572990). Does not bind to promoters of other major storage genes such as glutelin, prolamin and albumin (PubMed:9049271). Binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters (PubMed:11133985). {ECO:0000269|PubMed:11133985, ECO:0000269|PubMed:11572990, ECO:0000269|PubMed:9049271}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G016150_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7283550.0KJ728355.1 Zea mays clone pUT6637 bZIP transcription factor (bZIP128) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001105687.10.0opaque2 heterodimerizing protein 1
SwissprotQ7X9A81e-179RSBZ2_ORYSJ; bZIP transcription factor RISBZ2
TrEMBLA0A060CZ750.0A0A060CZ75_MAIZE; BZIP transcription factor (Fragment)
STRINGGRMZM2G016150_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34883878
Representative plantOGRP18391639
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.22e-39bZIP family protein
Publications ? help Back to Top
  1. Onodera Y,Suzuki A,Wu CY,Washida H,Takaiwa F
    A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif.
    J. Biol. Chem., 2001. 276(17): p. 14139-52
    [PMID:11133985]
  2. Yang D,Wu L,Hwang YS,Chen L,Huang N
    Expression of the REB transcriptional activator in rice grains improves the yield of recombinant proteins whose genes are controlled by a Reb-responsive promoter.
    Proc. Natl. Acad. Sci. U.S.A., 2001. 98(20): p. 11438-43
    [PMID:11572990]
  3. Cheng S,Wang Z,Hong M
    Rice bZIP protein, REB, interacts with GCN4 motif in promoter of Waxy gene.
    Sci. China, C, Life Sci., 2002. 45(4): p. 352-60
    [PMID:18759022]