PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G008166_P01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 194aa    MW: 21583.3 Da    PI: 10.55
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G008166_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_122.13.3e-07116167757
                        HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHH CS
             bZIP_1   7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk.keleelkkeva 57 
                         rr++kN e+A+   + K a+i eLe +v++L+  N++L+ k++e+lkk+ +
  GRMZM2G008166_P01 116 KRRMIKNMESATNNSLNKHAYIIELEAEVAKLKDLNDELQkKQVEMLKKQKD 167
                        69************************************96156888888765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0056110175IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.34E-5114158No hitNo description
CDDcd147077.17E-17114168No hitNo description
Gene3DG3DSA:1.20.5.1702.0E-6115168No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MTLEDFLVRA GVVREDMGQQ TLVLQPLAQG LFSQGNAVAL APQTMQLGNG VLTGVVGQGL  60
GGGMTVAVPT TPVVFNVMRK LEAGDLYRPL QLTMPIGTTL RVRTSRAERK VVERMKRRMI  120
KNMESATNNS LNKHAYIIEL EAEVAKLKDL NDELQKKQVE MLKKQKDEVL ERINNQHGPK  180
AKKLCLHRTL TGPW
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G008166
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots, shoots, leaves, flag leaves, stems, flowers and panicles (PubMed:20576316). Widely expressed (PubMed:21546455). {ECO:0000269|PubMed:20576316, ECO:0000269|PubMed:21546455}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in abscisic acid (ABA) signaling pathway (PubMed:20576316, PubMed:19947981, PubMed:21546455, PubMed:22301130, PubMed:26300907, PubMed:27468891). Transcription factor activity is fully activated by ABA (PubMed:19947981, PubMed:26300907, PubMed:27468891). Acts as positive regulator of the expression of abiotic stress-responsive genes through an ABA-dependent signaling pathway (PubMed:20576316). Acts as positive regulator of ABA signaling and drought stress tolerance (PubMed:22301130). Plays an important role in ABA and auxin responses. Involved in ABA signaling and stress responses by directly binding to the ABA-responsive element (ABRE)-containing genes, especially WRKY family genes. Modulates response to auxin. Suppresses auxin signaling by targeting ABRE-containing genes related to auxin metabolism or signaling (PubMed:21546455). {ECO:0000269|PubMed:19947981, ECO:0000269|PubMed:20576316, ECO:0000269|PubMed:21546455, ECO:0000269|PubMed:22301130, ECO:0000269|PubMed:26300907, ECO:0000269|PubMed:27468891}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G008166_P01
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) (PubMed:20576316, PubMed:18315698, PubMed:21546455, PubMed:22301130). Induced by auxin (PubMed:21546455, PubMed:22301130). Induced by gibberellin (PubMed:21546455). Induced by salt and drought stresses (PubMed:20576316, PubMed:21546455, PubMed:22301130). Induced by cold stress (PubMed:20576316). Induced by oxidative stress (PubMed:20576316, PubMed:22301130). {ECO:0000269|PubMed:18315698, ECO:0000269|PubMed:20576316, ECO:0000269|PubMed:21546455, ECO:0000269|PubMed:22301130}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9651970.0EU965197.1 Zea mays clone 284430 bZIP transcription factor family protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004964902.18e-92bZIP transcription factor 46
SwissprotQ69TW53e-58BZP46_ORYSJ; bZIP transcription factor 46
TrEMBLA0A1D6LVA45e-92A0A1D6LVA4_MAIZE; Putative bZIP transcription factor superfamily protein
STRINGGRMZM2G008166_P011e-140(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70638147
Representative plantOGRP5401580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34000.22e-27abscisic acid responsive elements-binding factor 3
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Hossain MA, et al.
    The ABRE-binding bZIP transcription factor OsABF2 is a positive regulator of abiotic stress and ABA signaling in rice.
    J. Plant Physiol., 2010. 167(17): p. 1512-20
    [PMID:20576316]
  3. Yang X, et al.
    Rice ABI5-Like1 regulates abscisic acid and auxin responses by affecting the expression of ABRE-containing genes.
    Plant Physiol., 2011. 156(3): p. 1397-409
    [PMID:21546455]
  4. Li YS, et al.
    A novel nuclear protein phosphatase 2C negatively regulated by ABL1 is involved in abiotic stress and panicle development in rice.
    Mol. Biotechnol., 2013. 54(2): p. 703-10
    [PMID:23086454]
  5. Guo C,Ge X,Ma H
    The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages.
    Plant Mol. Biol., 2013. 82(3): p. 239-53
    [PMID:23686450]
  6. Huang X, et al.
    OsSLI1, a homeodomain containing transcription activator, involves abscisic acid related stress response in rice (Oryza sativa L.).
    ScientificWorldJournal, 2014. 2014: p. 809353
    [PMID:25089296]
  7. Kim N, et al.
    Functional characterization and reconstitution of ABA signaling components using transient gene expression in rice protoplasts.
    Front Plant Sci, 2015. 6: p. 614
    [PMID:26300907]
  8. Chen H, et al.
    Characterization of OsPM19L1 encoding an AWPM-19-like family protein that is dramatically induced by osmotic stress in rice.
    Genet. Mol. Res., 2015. 14(4): p. 11994-2005
    [PMID:26505346]
  9. Tang N, et al.
    MODD Mediates Deactivation and Degradation of OsbZIP46 to Negatively Regulate ABA Signaling and Drought Resistance in Rice.
    Plant Cell, 2016. 28(9): p. 2161-2177
    [PMID:27468891]