PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AC232238.2_FGP004
Common NameZEAMMB73_657560
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 537aa    MW: 57980.1 Da    PI: 6.9586
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AC232238.2_FGP004genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1383.7e-12224253433
                        XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 
                         k err+++NReAAr+sR+RKka++++Le+
  AC232238.2_FGP004 224 AKTERRLAQNREAARKSRLRKKAYVQQLET 253
                        799*************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0027221274IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.795223259IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.2E-8223266No hitNo description
PfamPF001702.3E-9224253IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.58E-7225268No hitNo description
PROSITE patternPS000360228243IPR004827Basic-leucine zipper domain
PfamPF141449.5E-29308383IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 537 aa     Download sequence    Send to blast
MVQGEESSWR MERAALPLNQ ALAYGVQAHG AGGAAAAPPT CFLDFHQPAA AAAAYFGFGE  60
LEEALIHGGG GGVDPGVITK NDVAQAKSAA AAAGYLAGAA ARPPTLEIFP SLPMRHQQQL  120
HSGNSQSVGS TTDSSSAQNA MSQMELASPA ASSAPRQEAM MVTADGYSYK PGLAAAAAGA  180
APPSFQFQQQ HQHHHPLPLH GDGGGDHDKR KHGSTGKDGK LVDAKTERRL AQNREAARKS  240
RLRKKAYVQQ LETTRIRLQH VEHEFQRARS HSQGVGVGGC GAAGDMSCGA AMFDMEYARW  300
LDDDSKRLAE LRGGLQAHLL LDANLGLIVE ECMQHHDELF QLKAALARSD VFHLLTGSWT  360
TPAERCFFWM GGFRPSELLK VLIPQLDPLT EQQLLGICSL QQSSEQAEEA LAQGLHQLHQ  420
ALADTVAAGT LNEGSAAPNC MNIMAVALDK IASLENFYQQ ADNLRQQTLH QMRRILTTRQ  480
AARCFLSIGE YYSRLRALSN LWASRPGDTF IRSESLSPTA TELQALHHQR QNQFSGF
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.168550.0ear| meristem
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasAC232238.2_FG004
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expression in meristem/developing ligule regions. {ECO:0000269|PubMed:9490265}.
Functional Description ? help Back to Top
Source Description
UniProtRequired for the formation of the blade-sheath boundary in leaves. Promotes flowering. {ECO:0000269|PubMed:9490265}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAC232238.2_FGP004
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF0369490.0AF036949.1 Zea mays basic leucine zipper protein (liguleless2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008657030.10.0transcription factor LG2-like isoform X1
SwissprotO490670.0LG2_MAIZE; Transcription factor LG2
TrEMBLQ84UA50.0Q84UA5_MAIZE; Liguleless2-like protein
STRINGAC232238.2_FGP0040.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38093166
Representative plantOGRP1069649
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-121bZIP family protein
Publications ? help Back to Top
  1. Walsh J,Freeling M
    The liguleless2 gene of maize functions during the transition from the vegetative to the reproductive shoot apex.
    Plant J., 1999. 19(4): p. 489-95
    [PMID:10504571]
  2. Langham RJ, et al.
    Genomic duplication, fractionation and the origin of regulatory novelty.
    Genetics, 2004. 166(2): p. 935-45
    [PMID:15020478]
  3. Schnable PS, et al.
    The B73 maize genome: complexity, diversity, and dynamics.
    Science, 2009. 326(5956): p. 1112-5
    [PMID:19965430]