PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AC203957.3_FGP004
Common NameLOC100381716
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family bZIP
Protein Properties Length: 170aa    MW: 19000 Da    PI: 9.2243
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AC203957.3_FGP004genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.34.4e-153284355
                       XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55
                       e +r rrk++NRe+ArrsR+RK++  + L+  v++L+++Nk+L   l++ +++
  AC203957.3_FGP004 32 EKRRKRRKESNRESARRSRLRKQQHHDDLTSQVDQLKGQNKQLNLALSTTSQN 84
                       6789***************************************9777666555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.1E-112685No hitNo description
SMARTSM003382.7E-153094IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.9553295IPR004827Basic-leucine zipper domain
PfamPF001701.6E-123281IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.88E-113486No hitNo description
CDDcd147027.89E-163583No hitNo description
PROSITE patternPS0003603752IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MSSGSSFGSS QWTQRSRSAE DDLDLDLQAE MEKRRKRRKE SNRESARRSR LRKQQHHDDL  60
TSQVDQLKGQ NKQLNLALST TSQNLVAVQA QNSVLQTQRM ELASRLGALT EILWCISSST  120
GTAAPPTNPA MVNGGVTTTW SWSDASGDIL GASAWNHQQQ QPIDAYRCYY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13238KRRKRRK
23439RKRRKE
34652RRSRLRK
44653RRSRLRKQ
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasAC203957.3_FG004
Cis-element ? help Back to Top
SourceLink
PlantRegMapAC203957.3_FGP004
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0620690.0BT062069.1 Zea mays full-length cDNA clone ZM_BFb0212E11 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001167995.11e-122uncharacterized LOC100381716
TrEMBLC0HIB31e-121C0HIB3_MAIZE; BZIP transcription factor 11
TrEMBLK4JC861e-121K4JC86_MAIZE; BZIP-type transcription factor (Fragment)
STRINGAC203957.3_FGP0041e-122(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37403276
Representative plantOGRP1070849
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.13e-14basic leucine-zipper 44