PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015901112.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family GeBP
Protein Properties Length: 264aa    MW: 31736.1 Da    PI: 8.1716
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015901112.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57374.42e-2342137598
          DUF573   5 rlwseeDeivlLqGlidfkaktgk.spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfs.kehdqkifelskkiWg 97 
                      +wse+Dei++L Gli+ ++   +   ++++++fy+ +k+s+ ++vs++q+++Ki+rLK+Kf +++k++  + + s++  +h + +felsk++W+
  XP_015901112.1  42 TVWSEKDEITILEGLIKLQKICSSlGKKSNMNQFYSLIKDSLVADVSSEQFTDKIKRLKRKFMQNKKNKLADPNLSIDyDSHSKRVFELSKQMWD 136
                     58****************88776647788************************************99955555555542578899*********8 PP

          DUF573  98 s 98 
                     +
  XP_015901112.1 137 Q 137
                     5 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045046.4E-1943136IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MASSHSTSTY ESSDYEMEVV RDSEEEEEYV PEEKKRRNKK ITVWSEKDEI TILEGLIKLQ  60
KICSSLGKKS NMNQFYSLIK DSLVADVSSE QFTDKIKRLK RKFMQNKKNK LADPNLSIDY  120
DSHSKRVFEL SKQMWDQCVW EPESEEKRKT KEMVNNKIDD SADDDDKKKI VKKKKKRKIT  180
TESVNVYHKA FHKYCEDRGL EVKWLEKEER DKLDNLWRQF SELECDLRIL EIKYNRLRND  240
LDVTIYRLLI RCYNNFPALF SFDY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13338KKRRNK
2171177KKKKKRK
3172177KKKKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015901112.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015901112.10.0transcription factor STKL2-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2838433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00610.11e-11DNA-binding storekeeper protein-related transcriptional regulator