PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015894304.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family Trihelix
Protein Properties Length: 334aa    MW: 37852.3 Da    PI: 9.7107
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015894304.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix55.31.8e-1764158286
        trihelix   2 WtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 
                     Wt qe+l Li+a++ +eer  +++            + + +W++v ++++++g+ rs++qC++kw+nl ++ykk++e e++   +s+   p + +
  XP_015894304.1  64 WTIQETLILITAKKLDEERRYKARsappdptststtKGELRWKWVENYCWSQGCLRSSNQCNDKWDNLLRDYKKVREYESNA--QSKPDLPSYWN 156
                     **************77777776544667777777768899****************************************96..45556888888 PP

        trihelix  85 le 86 
                     +e
  XP_015894304.1 157 ME 158
                     87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.91156132IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.602.4E-457134IPR009057Homeodomain-like
PfamPF138372.8E-1363158No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MSEPTTTSPA ATISPPVNPQ QQQQQQQQPH HHRKSPHFSA ASVGPTTSSS TSTPIEREYR  60
KGNWTIQETL ILITAKKLDE ERRYKARSAP PDPTSTSTTK GELRWKWVEN YCWSQGCLRS  120
SNQCNDKWDN LLRDYKKVRE YESNAQSKPD LPSYWNMEKQ DRKLRNLPSN MALEVFQALN  180
EVLQRKYSTQ TTALRDPQTL SVSPSPAPLA ARPLLPAPTT SAPAPSERSD SSGTEASEKD  240
EETSDTKRKK HGKISSSIKR SASLLAKTLQ NCEEKKEKRH REIMEMERKK LEIEEAHNEV  300
NRQGMVNLVG AVANLSTAIQ SLISYHHHPH HQPT
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015894304.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015894304.10.0trihelix transcription factor ASR3-like
TrEMBLA0A2N9EPS21e-109A0A2N9EPS2_FAGSY; Uncharacterized protein
STRINGXP_002521872.11e-107(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68043242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.18e-43Trihelix family protein