PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015891503.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 360aa    MW: 40498.7 Da    PI: 10.1038
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015891503.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.22.5e-31294351359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ e+p+++++tYegeHnh+
  XP_015891503.1 294 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHP 351
                     99***********************9988****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105334.4E-18245290IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.6E-33280352IPR003657WRKY domain
PROSITE profilePS5081130.067287353IPR003657WRKY domain
SuperFamilySSF1182903.79E-27290352IPR003657WRKY domain
SMARTSM007742.0E-38292352IPR003657WRKY domain
PfamPF031063.0E-27294351IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MEEVEEANRA AVESCHRVLS LLSQPQDQVQ YRNLAMETGE AVFRFKRVVS LLNTGLGHAR  60
VRKLKNLASP LPHPLPQSIL LDNPNCRTDN LSKTPHFLHS SFPEHPIQEL RSNVKSSLCL  120
GNPSLELSSN GKSPLQLAQA TQAHYHFLQQ QQQQQQQQPQ LQQQQQRLLQ QHQQQQMKHQ  180
AEMLFRKSNS GINLNFDSSS CTPTMSSTRS FISSLSIDGS VANLDGNSFH LIGAPRSSDQ  240
NSQHKRKCSG RGDDGSVKCG SSGRCHCSKK RKHRVKRSIK VPAISNKLAD IPPDDYSWRK  300
YGQKPIKGSP HPRGYYKCSS MRGCPARKHV ERCLEEPSML IVTYEGEHNH PRMTSQSANT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-202883501071WRKY transcription factor 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00284DAPTransfer from AT2G30590Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015891502.10.0PREDICTED: probable WRKY transcription factor 21
RefseqXP_015891503.10.0PREDICTED: probable WRKY transcription factor 21
SwissprotO043361e-131WRK21_ARATH; Probable WRKY transcription factor 21
TrEMBLA0A141E6C10.0A0A141E6C1_MORAL; Transcription factor WRKY21-like protein
STRINGGLYMA02G15920.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-108WRKY DNA-binding protein 21