PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015891454.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 141aa    MW: 16051.7 Da    PI: 5.0825
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015891454.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.7e-191970256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+G+r+++ +g+++AeIrdps ng  +r +lg+f taeeAa+a+++a+ +++g+
  XP_015891454.1 19 RYRGIRRRP-WGKFAAEIRDPSRNG--ARLWLGTFNTAEEAARAYDRAAFAFRGH 70
                    69*******.**********98887..*************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.58E-281878No hitNo description
Gene3DG3DSA:3.30.730.101.4E-311978IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-231978IPR016177DNA-binding domain
SMARTSM003807.6E-371983IPR001471AP2/ERF domain
PROSITE profilePS5103225.1461977IPR001471AP2/ERF domain
PfamPF008476.4E-141970IPR001471AP2/ERF domain
PRINTSPR003672.4E-112031IPR001471AP2/ERF domain
PRINTSPR003672.4E-114359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    Send to blast
MEGKRQGMNE QEGRDREARY RGIRRRPWGK FAAEIRDPSR NGARLWLGTF NTAEEAARAY  60
DRAAFAFRGH SAILNFPNEF RYQNSNSLPA SSSSLPGAVI EIENGLGTRQ EREVIEFEYL  120
DDKLLEELLG IEENGQGNNT Q
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-311712412114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015891454.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015891454.12e-98ethylene-responsive transcription factor ERF098-like
SwissprotQ9LTC59e-46ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A2P5X7W96e-52A0A2P5X7W9_GOSBA; Uncharacterized protein
STRINGGorai.001G252700.12e-50(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.12e-29ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]