PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015891360.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family ERF
Protein Properties Length: 134aa    MW: 15456.1 Da    PI: 5.8608
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015891360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.3e-201868255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +g+++AeIrd + ng   r++lg+f taeeAa+a+++a+ +++g
  XP_015891360.1 18 RYRGVRRRP-WGKYAAEIRDSRRNG--VRVWLGTFNTAEEAARAYDRAAFAMRG 68
                    6********.**********54454..*************************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.57E-291877No hitNo description
Gene3DG3DSA:3.30.730.105.7E-321878IPR001471AP2/ERF domain
PROSITE profilePS5103223.7751876IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-241878IPR016177DNA-binding domain
PfamPF008473.1E-151868IPR001471AP2/ERF domain
SMARTSM003801.0E-351882IPR001471AP2/ERF domain
PRINTSPR003679.6E-121930IPR001471AP2/ERF domain
PRINTSPR003679.6E-124258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
MDERRKEEVK EQEQKNVRYR GVRRRPWGKY AAEIRDSRRN GVRVWLGTFN TAEEAARAYD  60
RAAFAMRGPL AILNFPDEHC LTTGDSASGA SSSSSSTNVE KNREDQGKHV LELEYLDDKL  120
LEELLDCDNQ DKKY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-351812014114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_015891360.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015891360.16e-96ethylene-responsive transcription factor ERF098-like
SwissprotQ9LTC53e-39ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A3Q8TD922e-52A0A3Q8TD92_FRAAN; Transcription factor ERF81
STRINGXP_004292207.13e-51(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.17e-24ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]