PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015881298.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 282aa    MW: 30475.8 Da    PI: 5.5471
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015881298.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.44.5e-3174132259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++++itY geHnh+
  XP_015881298.1  74 TDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTTLVITYAGEHNHP 132
                     69*************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.0E-3265134IPR003657WRKY domain
PROSITE profilePS5081133.33868134IPR003657WRKY domain
SuperFamilySSF1182901.02E-2669134IPR003657WRKY domain
SMARTSM007741.9E-3773133IPR003657WRKY domain
PfamPF031064.7E-2675132IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MNHEFHTKTF VTDPEYPEPG SEIGPDSPSS GDDTKIITEP SPKKSKRGVQ KRVVSVPIGD  60
VEGSKSKAET HPPTDSWAWR KYGQKPIKGS PYPRGYYRCS SSKGCPARKQ VERSRVDPTT  120
LVITYAGEHN HPVPTKSHHS SYAAAAGVGA GAVAVAMSPT DEVPAKFAPE EELAVFASQP  180
ELELSDDSAA LLDQHGQHHR HHWFDDVAST ALLESPICAG SSACMDAYVA VLFGEKDDEE  240
SLFADLGELP ECSVVFRRRI VEPEEQNRSC SLSAVPCCGS TG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-19741341574WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015881298.10.0PREDICTED: probable WRKY transcription factor 69
SwissprotQ93WV55e-73WRK69_ARATH; Probable WRKY transcription factor 69
TrEMBLA0A0D6DR541e-114A0A0D6DR54_HUMLU; WRKY transcription factor
STRINGGLYMA12G33990.17e-93(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27703475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.14e-73WRKY DNA-binding protein 69