PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_015869999.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rhamnaceae; Paliureae; Ziziphus
Family WRKY
Protein Properties Length: 625aa    MW: 67533.5 Da    PI: 7.9731
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_015869999.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.73.3e-30275334159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+Hnh+
  XP_015869999.1 275 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCADDMSILTTTYEGTHNHP 334
                     58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-31260336IPR003657WRKY domain
SuperFamilySSF1182904.05E-27268336IPR003657WRKY domain
PROSITE profilePS5081127.875270336IPR003657WRKY domain
SMARTSM007743.0E-36275335IPR003657WRKY domain
PfamPF031068.4E-27276334IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 625 aa     Download sequence    Send to blast
MVTNDFLIQL IFVSDHLIVL KIEHGGAKQK ITDDITPSSP KQQDLISCIK QVPSNTTGIE  60
SSSMERDSMV SSSSRKEQDE QLVSTRAEMG EVREENQRLK MYLDRIMKDY QTLQMQFYGI  120
VQHEAKKSTT TSEAISKNHQ QETDQEAELI SLRLGSFSSI TNYYPKKDEK NKASSDHGKE  180
TSSTTDHQVE EGLALGLDCK FEPSKSSGAT DQGPLSNPSP ASSFEETNKE EARETWPPPN  240
KSLTAKRSTD DEVSQQSPAK KARVSVRARC DTPTMNDGCQ WRKYGQKIAK GNPCPRAYYR  300
CTVAPSCPVR KQVQRCADDM SILTTTYEGT HNHPLPISAT AMASTTSAAA SMLLSASTTS  360
SSRSVLNPLS ATTTPADLHG LNFYLSGNSN LKQFYLPNAP LSSTSHPTIT LDLTSNPSSS  420
SLFNKFSPNY PPLYSSSTSL NFGSSESNLM SWSNNGFLSY GTSNSQPYNN SRTQIGNLSL  480
GRQSGTSTST MQQQNNVFQN FLQKNGNNAV PHNPRPQGSI LLPQQALPDT LAAATKAITA  540
DPSFQSALAA ALSTIIGTQG NHGGGGGGSY VQTTKGNNGC ASSYLNRTTS NLQPGNSMFA  600
SSSSLPFSNS KSGSASSGDH REQTN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A9e-20262336174WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015869999.10.0PREDICTED: probable WRKY transcription factor 61
TrEMBLA0A061G4200.0A0A061G420_THECC; WRKY DNA-binding protein 72, putative
STRINGVIT_17s0000g05810.t011e-174(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.11e-81WRKY DNA-binding protein 72