PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00136.1.g00120.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 142aa    MW: 15656.5 Da    PI: 9.0187
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00136.1.g00120.1.sm.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-191667155
                           AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                                  ++y+GVr+++ +g+++AeIrd      ++ r++lg+f taeeAa+a+++a+  ++g
  Zjn_sc00136.1.g00120.1.sm.mk 16 TKYRGVRRRP-SGKFAAEIRDS---RrQSERIWLGTFNTAEEAARAYDRAAYIMRG 67
                                  69********.7*********3...2345***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.69E-181675No hitNo description
PfamPF008472.0E-141667IPR001471AP2/ERF domain
SMARTSM003801.6E-311781IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.8E-301775IPR001471AP2/ERF domain
PROSITE profilePS5103222.4051775IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-221775IPR016177DNA-binding domain
PRINTSPR003679.2E-101829IPR001471AP2/ERF domain
PRINTSPR003679.2E-104157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    Send to blast
MEGSACEHGK DSIEVTKYRG VRRRPSGKFA AEIRDSRRQS ERIWLGTFNT AEEAARAYDR  60
AAYIMRGQLA VLNFPGEAHN YVRGSSSSQQ PQQGAGGGGS GRRAIELEYL DDKVLQDLLL  120
KGDDGKKTKD FLHVITEILG VA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A8e-231875663ATERF1
2gcc_A8e-231875663ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003571268.14e-40PREDICTED: ethylene-responsive transcription factor 14-like
RefseqXP_006660393.16e-40PREDICTED: ethylene-responsive transcription factor 14-like
SwissprotQ9LSX03e-33ERF96_ARATH; Ethylene-responsive transcription factor ERF096
TrEMBLK3YCJ33e-48K3YCJ3_SETIT; Uncharacterized protein
STRINGSi011941m8e-48(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.18e-22ERF family protein