PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00066.1.g02740.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 242aa    MW: 26024.1 Da    PI: 6.6793
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00066.1.g02740.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.52.4e-164393155
                           AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  ++ykGVr +k +g+Wv+eIr p++   r r++lg+++ +e+Aa+a +aa  +l+g
  Zjn_sc00066.1.g02740.1.am.mk 43 KKYKGVRLRK-WGKWVSEIRLPNS---RERIWLGSYDAPEKAARAFDAAFVCLRG 93
                                  59******99.**********933...5*********************999987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.40E-2443106No hitNo description
PROSITE profilePS5103220.91644104IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-1844106IPR016177DNA-binding domain
SMARTSM003801.3E-2844110IPR001471AP2/ERF domain
PfamPF008475.6E-94492IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.4E-2644106IPR001471AP2/ERF domain
PRINTSPR003672.8E-84556IPR001471AP2/ERF domain
PRINTSPR003672.8E-86783IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MRRRRPTRHS RVESPVNAPR APAETSISGM SSSPEMEGGR ESKKYKGVRL RKWGKWVSEI  60
RLPNSRERIW LGSYDAPEKA ARAFDAAFVC LRGSGAAGAD LNFPDSPPPC RASCSIDPQE  120
VQAAALSHAN RAAVTAREAA AALMDVDDSP PAATLSREAL AHGAGFLDAG RGIEVVAPVR  180
ADGSIDWRPV MAHPPPLYSP IGWGSNAYDF LQMPPAAEAA DEDTEETIHG ASASLWSFDS  240
RY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004954129.14e-92PREDICTED: ethylene-responsive transcription factor ERF018-like
TrEMBLK3YZC85e-92K3YZC8_SETIT; Uncharacterized protein
STRINGSi019636m1e-91(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86132144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.11e-33ERF family protein